RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
CCDC59-203ENST00000548126 PANK3Q9H999 370 aa8.83□□□□□ -1
CCDC59-203ENST00000548126 RRP7AQ9Y3A4 280 aaKnown RBP8.83□□□□□ -1
CCDC59-203ENST00000548126 LAMB1P07942 1786 aa8.83□□□□□ -1
CCDC59-203ENST00000548126 EDN3P14138 238 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 HCLS1P14317 486 aaPredicted RBP8.82□□□□□ -1
CCDC59-203ENST00000548126 ATP2B4P23634 1241 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 GJA8P48165 433 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 GPSM2P81274 684 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 NFKBIBQ15653 356 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 LRIT3Q3SXY7 679 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 ABI1Q8IZP0 508 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 FAM122AQ96E09 287 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 ASIC4Q96FT7 647 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 POLR3GLQ9BT43 218 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 TMPRSS13Q9BYE2 586 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 ZC3H12CQ9C0D7 883 aaKnown RBP8.82□□□□□ -1
CCDC59-203ENST00000548126 LRRC37AA6NMS7 1700 aa8.82□□□□□ -1
CCDC59-203ENST00000548126 UNCXA6NJT0 531 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 GJB1P08034 283 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
CCDC59-203ENST00000548126 MAP3K11Q16584 847 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 ALKBH2Q6NS38 261 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 ATCAYQ86WG3 371 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 TBC1D16Q8TBP0 767 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 HELQQ8TDG4 1101 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 OSMRQ99650 979 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 GDF15Q99988 308 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 RAPGEFL1Q9UHV5 662 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 LAMB4A4D0S4 1761 aa8.81□□□□□ -1
CCDC59-203ENST00000548126 WNT10BO00744 389 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 PRNPP04156 253 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 F13BP05160 661 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 MYL6BP14649 208 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 PRMT2P55345 433 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 MSMPQ1L6U9 139 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 EXOSC6Q5RKV6 272 aaKnown RBP8.8□□□□□ -1
CCDC59-203ENST00000548126 TP53INP2Q8IXH6 220 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 NXPE3Q969Y0 559 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 CCDC39Q9UFE4 941 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 FZD1Q9UP38 647 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 PSME4Q14997 1843 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 RPTORQ8N122 1335 aa8.8□□□□□ -1
CCDC59-203ENST00000548126 CYP26A1O43174 497 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 FARP2O94887 1054 aaPredicted RBP8.79□□□□□ -1
CCDC59-203ENST00000548126 TIAF1O95411 115 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 PDGFAP04085 211 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 ACPPP15309 386 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 KIF22Q14807 665 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 HP1BP3Q5SSJ5 553 aaPredicted RBP8.79□□□□□ -1
CCDC59-203ENST00000548126 AGBL5Q8NDL9 886 aa8.79□□□□□ -1
CCDC59-203ENST00000548126 CELF1Q92879 486 aaKnown RBP8.79□□□□□ -1
CCDC59-203ENST00000548126 BSDC1Q9NW68 430 aaPredicted RBP8.79□□□□□ -1
CCDC59-203ENST00000548126 LOC100289279A0A1B0GTE1 492 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 PHACTR2O75167 634 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 CCL5P13501 91 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 EHHADHQ08426 723 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 TAF1CQ15572 869 aaPredicted RBP8.78□□□□□ -1
CCDC59-203ENST00000548126 APOBEC3FQ8IUX4 373 aaKnown RBP8.78□□□□□ -1
CCDC59-203ENST00000548126 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
CCDC59-203ENST00000548126 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 SEPT3Q9UH03 358 aa8.78□□□□□ -1
CCDC59-203ENST00000548126 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
CCDC59-203ENST00000548126 USP5P45974 858 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 MMP14P50281 582 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 LACTBP83111 547 aaPredicted RBP8.77□□□□□ -1.01
CCDC59-203ENST00000548126 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 TAF7Q15545 349 aaPredicted RBP8.77□□□□□ -1.01
CCDC59-203ENST00000548126 FAM109BQ6ICB4 259 aaPredicted RBP8.77□□□□□ -1.01
CCDC59-203ENST00000548126 MCM10Q7L590 875 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 VN1R5Q7Z5H4 357 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 TDHQ8IZJ6 230 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 SNX29Q8TEQ0 813 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 TBC1D32Q96NH3 1257 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 GUCD1Q96NT3 240 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 HHIPQ96QV1 700 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 ZKSCAN3Q9BRR0 538 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 ZFYVE1Q9HBF4 777 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 USTQ9Y2C2 406 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 KNSTRNQ9Y448 316 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1.01
CCDC59-203ENST00000548126 U2SURPO15042 1029 aaKnown RBP8.76□□□□□ -1.01
CCDC59-203ENST00000548126 UFL1O94874 794 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 SGPL1O95470 568 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 JUNBP17275 347 aaPredicted RBP8.76□□□□□ -1.01
CCDC59-203ENST00000548126 CAPN2P17655 700 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 GRK4P32298 578 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 RPS8P62241 208 aaKnown RBP8.76□□□□□ -1.01
CCDC59-203ENST00000548126 SF3B3Q15393 1217 aaKnown RBP8.76□□□□□ -1.01
CCDC59-203ENST00000548126 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 U2AF1L4Q8WU68 220 aaKnown RBP8.76□□□□□ -1.01
CCDC59-203ENST00000548126 DEFB129Q9H1M3 183 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 CHRDQ9H2X0 955 aa8.76□□□□□ -1.01
CCDC59-203ENST00000548126 MIS18AQ9NYP9 233 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms