RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 SDSP20132 328 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
KRT18-204ENST00000548015 PSMC6P62333 389 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 DUSP28Q4G0W2 176 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 PLEKHM2Q8IWE5 1019 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 TMEM199Q8N511 208 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 TTC14Q96N46 770 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 ZNF576Q9H609 170 aa12.91□□□□□ -0.34
KRT18-204ENST00000548015 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
KRT18-204ENST00000548015 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
KRT18-204ENST00000548015 ZEB2O60315 1214 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 B4GALT4O60513 344 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 SLC30A10Q6XR72 485 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 MFSD6Q6ZSS7 791 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
KRT18-204ENST00000548015 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 WDR11Q9BZH6 1224 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
KRT18-204ENST00000548015 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 EDNRBP24530 442 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 CALML3P27482 149 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 CCL23P55773 120 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 RPS6P62753 249 aaKnown RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 SEZ6LQ9BYH1 1024 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 WNT8AQ9H1J5 351 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 OSBPL3Q9H4L5 887 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
KRT18-204ENST00000548015 PARP14Q460N5 1801 aa12.89□□□□□ -0.35
KRT18-204ENST00000548015 NEDD4P46934 1319 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 NUCB1Q02818 461 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
KRT18-204ENST00000548015 TRMT13Q9NUP7 481 aaKnown RBP12.88□□□□□ -0.35
KRT18-204ENST00000548015 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
KRT18-204ENST00000548015 CHD9Q3L8U1 2897 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 FGBP02675 491 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 PURAQ00577 322 aaKnown RBP12.87□□□□□ -0.35
KRT18-204ENST00000548015 AAMPQ13685 434 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
KRT18-204ENST00000548015 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 ESR2Q92731 530 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 COPS5Q92905 334 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
KRT18-204ENST00000548015 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
KRT18-204ENST00000548015 COL11A1P12107 1806 aaPredicted RBP12.87□□□□□ -0.35
KRT18-204ENST00000548015 MUC3AQ02505 3323 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 ZNF213O14771 459 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 CYP2C9P11712 490 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
KRT18-204ENST00000548015 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 OR6J1Q8NGC5 347 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 PPP1R13LQ8WUF5 828 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 SCLYQ96I15 445 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 MTG1Q9BT17 334 aaPredicted RBP12.86□□□□□ -0.35
KRT18-204ENST00000548015 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
KRT18-204ENST00000548015 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
KRT18-204ENST00000548015 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
KRT18-204ENST00000548015 A6NJR5 290 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 B4E1Z4 1266 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 KDM4AO75164 1064 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 ARIH2O95376 493 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 MYL3P08590 195 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
KRT18-204ENST00000548015 PDE4DQ08499 809 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 DNERQ8NFT8 737 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
KRT18-204ENST00000548015 IL25Q9H293 177 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 PRDM12Q9H4Q4 367 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
KRT18-204ENST00000548015 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms