RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 CDC37Q16543 378 aaPredicted RBP25.09■■□□□ 1.61
USP44-204ENST00000547951 FSCN1Q16658 493 aaKnown RBP25.09■■□□□ 1.61
USP44-204ENST00000547951 KIAA1211Q6ZU35 1233 aa25.09■■□□□ 1.61
USP44-204ENST00000547951 IQSEC1Q6DN90 963 aa25.08■■□□□ 1.61
USP44-204ENST00000547951 ADGRF4Q8IZF3 695 aa25.08■■□□□ 1.61
USP44-204ENST00000547951 TBC1D5Q92609 795 aa25.08■■□□□ 1.61
USP44-204ENST00000547951 AP5M1Q9H0R1 490 aa25.08■■□□□ 1.61
USP44-204ENST00000547951 ADD3Q9UEY8 706 aaKnown RBP25.08■■□□□ 1.61
USP44-204ENST00000547951 GRIN2DO15399 1336 aa25.08■■□□□ 1.6
USP44-204ENST00000547951 CCDC178Q5BJE1 867 aa25.07■■□□□ 1.6
USP44-204ENST00000547951 FAM126BQ8IXS8 530 aa25.07■■□□□ 1.6
USP44-204ENST00000547951 FAM161BQ96MY7 647 aa25.07■■□□□ 1.6
USP44-204ENST00000547951 KRT23Q9C075 422 aa25.07■■□□□ 1.6
USP44-204ENST00000547951 PSMC6P62333 389 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 FPGSQ05932 587 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 SEC23AQ15436 765 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 STAG2Q8N3U4 1231 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 UBAC1Q9BSL1 405 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 WDR11Q9BZH6 1224 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 RAD50Q92878 1312 aa25.06■■□□□ 1.6
USP44-204ENST00000547951 TIMP1P01033 207 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 CYP21A2P08686 494 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 NT5C2P49902 561 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 QRICH1Q2TAL8 776 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 DUSP28Q4G0W2 176 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 ASPRV1Q53RT3 343 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 SLC43A3Q8NBI5 491 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 GUCD1Q96NT3 240 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 CNNM2Q9H8M5 875 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 JMJD4Q9H9V9 463 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 SENP2Q9HC62 589 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 VAT1LQ9HCJ6 419 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 COL20A1Q9P218 1284 aa25.05■■□□□ 1.6
USP44-204ENST00000547951 CDH23Q9H251 3354 aa25.04■■□□□ 1.6
USP44-204ENST00000547951 PARP1P09874 1014 aaKnown RBP25.04■■□□□ 1.6
USP44-204ENST00000547951 EDNRBP24530 442 aa25.04■■□□□ 1.6
USP44-204ENST00000547951 PPP1R12CQ9BZL4 782 aa25.04■■□□□ 1.6
USP44-204ENST00000547951 MROH7Q68CQ1 1323 aa25.04■■□□□ 1.6
USP44-204ENST00000547951 RBM47A0AV96 593 aaKnown RBP25.03■■□□□ 1.6
USP44-204ENST00000547951 CD4P01730 458 aa25.03■■□□□ 1.6
USP44-204ENST00000547951 PDE4DQ08499 809 aa25.03■■□□□ 1.6
USP44-204ENST00000547951 SLC35G1Q2M3R5 365 aa25.03■■□□□ 1.6
USP44-204ENST00000547951 IFIT1BQ5T764 474 aaKnown RBP25.03■■□□□ 1.6
USP44-204ENST00000547951 RNPC3Q96LT9 517 aaKnown RBP25.03■■□□□ 1.6
USP44-204ENST00000547951 PNMA2Q9UL42 364 aa25.03■■□□□ 1.6
USP44-204ENST00000547951 Q9Y3F1 56 aa25.03■■□□□ 1.6
USP44-204ENST00000547951 SGSM2O43147 1006 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 DHX16O60231 1041 aaKnown RBP25.02■■□□□ 1.6
USP44-204ENST00000547951 ITGA7Q13683 1181 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 STOX1Q6ZVD7 989 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 C16orf59Q7L2K0 433 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 COPS5Q92905 334 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 TRPV6Q9H1D0 765 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 BAZ2BQ9UIF8 2168 aaKnown RBP25.02■■□□□ 1.6
USP44-204ENST00000547951 A0A0C4DFX4 3053 aa25.02■■□□□ 1.6
USP44-204ENST00000547951 LOC102724159A0A0B4J2E5 919 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 CYP2C18P33260 490 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 PWP2Q15269 919 aaKnown RBP25.01■■□□□ 1.59
USP44-204ENST00000547951 FAM109BQ6ICB4 259 aaPredicted RBP25.01■■□□□ 1.59
USP44-204ENST00000547951 MFSD5Q6N075 450 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 SKAP1Q86WV1 359 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 SYTL5Q8TDW5 730 aaPredicted RBP25.01■■□□□ 1.59
USP44-204ENST00000547951 PPP1R13LQ8WUF5 828 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 TAAR1Q96RJ0 339 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 MAD2L2Q9UI95 211 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 STXBP5LQ9Y2K9 1186 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 UMODL1Q5DID0 1318 aa25.01■■□□□ 1.59
USP44-204ENST00000547951 PPP1R11O60927 126 aaPredicted RBP25■■□□□ 1.59
USP44-204ENST00000547951 CABYRO75952 493 aa25■■□□□ 1.59
USP44-204ENST00000547951 ARIH2O95376 493 aa25■■□□□ 1.59
USP44-204ENST00000547951 CSF2RAP15509 400 aa25■■□□□ 1.59
USP44-204ENST00000547951 CHST3Q7LGC8 479 aa25■■□□□ 1.59
USP44-204ENST00000547951 RGS22Q8NE09 1264 aa25■■□□□ 1.59
USP44-204ENST00000547951 DNERQ8NFT8 737 aa25■■□□□ 1.59
USP44-204ENST00000547951 RUFY2Q8WXA3 655 aa25■■□□□ 1.59
USP44-204ENST00000547951 BUD13Q9BRD0 619 aaKnown RBP eCLIP25■■□□□ 1.59
USP44-204ENST00000547951 ABCB11O95342 1321 aa25■■□□□ 1.59
USP44-204ENST00000547951 OPLAHO14841 1288 aa24.99■■□□□ 1.59
USP44-204ENST00000547951 ACRP10323 421 aa24.99■■□□□ 1.59
USP44-204ENST00000547951 FBXO11Q86XK2 927 aa24.99■■□□□ 1.59
USP44-204ENST00000547951 OR6J1Q8NGC5 347 aa24.99■■□□□ 1.59
USP44-204ENST00000547951 TTYH1Q9H313 450 aaPredicted RBP24.99■■□□□ 1.59
USP44-204ENST00000547951 EYSQ5T1H1 3165 aa24.99■■□□□ 1.59
USP44-204ENST00000547951 KLRF2D3W0D1 207 aa24.98■■□□□ 1.59
USP44-204ENST00000547951 E7EWF7 191 aa24.98■■□□□ 1.59
USP44-204ENST00000547951 TLR3O15455 904 aaKnown RBP24.98■■□□□ 1.59
USP44-204ENST00000547951 ZEB2O60315 1214 aa24.98■■□□□ 1.59
USP44-204ENST00000547951 B4GALT4O60513 344 aa24.98■■□□□ 1.59
USP44-204ENST00000547951 MYL3P08590 195 aa24.98■■□□□ 1.59
USP44-204ENST00000547951 SMAD3P84022 425 aaKnown RBP24.98■■□□□ 1.59
USP44-204ENST00000547951 U3KPZ7 1027 aaPredicted RBP24.98■■□□□ 1.59
USP44-204ENST00000547951 SCN10AQ9Y5Y9 1956 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 KIAA1217Q5T5P2 1943 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 PALM3A6NDB9 673 aaPredicted RBP24.97■■□□□ 1.59
USP44-204ENST00000547951 ANTXR2P58335 489 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 PURAQ00577 322 aaKnown RBP24.97■■□□□ 1.59
USP44-204ENST00000547951 COL9A3Q14050 684 aaPredicted RBP24.97■■□□□ 1.59
USP44-204ENST00000547951 PPP2R5BQ15173 497 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 TMEM240Q5SV17 173 aa24.97■■□□□ 1.59
USP44-204ENST00000547951 ZNF697Q5TEC3 545 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms