RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
RAB5C-204ENST00000547517 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 ADCY6O43306 1168 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 EPB41L2O43491 1005 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 COL6A1P12109 1028 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 GNAQP50148 359 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 PRPF38BQ5VTL8 546 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 MCF2L2Q86YR7 1114 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 CMTR1Q8N1G2 835 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 RRP36Q96EU6 259 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 SPZ1Q9BXG8 430 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 NAP1L2Q9ULW6 460 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-204ENST00000547517 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
RAB5C-204ENST00000547517 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 PNMA6FA0A0J9YX94 578 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 OPLAHO14841 1288 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 ZBTB43O43298 467 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 CFBP00751 764 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 PSMA5P28066 241 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 ADCYAP1R1P41586 468 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 LRRC41Q15345 812 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 Q6ZUG5 572 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
RAB5C-204ENST00000547517 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-204ENST00000547517 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 SENP6Q9GZR1 1112 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-204ENST00000547517 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
RAB5C-204ENST00000547517 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
RAB5C-204ENST00000547517 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-204ENST00000547517 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 EVI5O60447 810 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 PDE4DQ08499 809 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 TRAF1Q13077 416 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 RTN1Q16799 776 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
RAB5C-204ENST00000547517 RNF180Q86T96 592 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 C7orf61Q8IZ16 206 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 FANCBQ8NB91 859 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 BRF1Q92994 677 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
RAB5C-204ENST00000547517 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
RAB5C-204ENST00000547517 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 hCG_1642624A0A1W2PR95 340 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 MYADML2A6NDP7 307 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 H0YGN5 161 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
RAB5C-204ENST00000547517 PTGS1P23219 599 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 EDNRBP24530 442 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-204ENST00000547517 HSD17B4P51659 736 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
RAB5C-204ENST00000547517 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
RAB5C-204ENST00000547517 LRRC26Q2I0M4 334 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 FERMT2Q96AC1 680 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 MAF1Q9H063 256 aa13.68□□□□□ -0.22
RAB5C-204ENST00000547517 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
RAB5C-204ENST00000547517 C6orf222P0C671 652 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-204ENST00000547517 SMPD1P17405 629 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
RAB5C-204ENST00000547517 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
RAB5C-204ENST00000547517 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 TAPT1Q6NXT6 567 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
RAB5C-204ENST00000547517 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
RAB5C-204ENST00000547517 SPC25Q9HBM1 224 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
RAB5C-204ENST00000547517 B4DLN1 442 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-204ENST00000547517 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB5C-204ENST00000547517 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
RAB5C-204ENST00000547517 GHRHRQ02643 423 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 TMEM63BQ5T3F8 832 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 HEATR3Q7Z4Q2 680 aa13.66□□□□□ -0.22
RAB5C-204ENST00000547517 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms