RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 CASTP20810 708 aaKnown RBP11.9□□□□□ -0.5
LINC02409-201ENST00000547515 RPS6P62753 249 aaKnown RBP11.9□□□□□ -0.5
LINC02409-201ENST00000547515 SYNE3Q6ZMZ3 975 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 Q6ZUG5 572 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
LINC02409-201ENST00000547515 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
LINC02409-201ENST00000547515 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 ABHD16BQ9H3Z7 469 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
LINC02409-201ENST00000547515 ADD3Q9UEY8 706 aaKnown RBP11.9□□□□□ -0.5
LINC02409-201ENST00000547515 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 OPLAHO14841 1288 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 ZBTB43O43298 467 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 AKR1A1P14550 325 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 CALML3P27482 149 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
LINC02409-201ENST00000547515 ACVR2BQ13705 512 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 RUFY3Q7L099 469 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 DNERQ8NFT8 737 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 SYTL5Q8TDW5 730 aaPredicted RBP11.89□□□□□ -0.51
LINC02409-201ENST00000547515 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
LINC02409-201ENST00000547515 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
LINC02409-201ENST00000547515 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 NID2Q14112 1375 aa11.89□□□□□ -0.51
LINC02409-201ENST00000547515 EDNRBP24530 442 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 HSD17B4P51659 736 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 EVCP57679 992 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 ANAPC15P60006 121 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 FGD1P98174 961 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 RTN1Q16799 776 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 NECAB2Q7Z6G3 386 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
LINC02409-201ENST00000547515 BRF1Q92994 677 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 IL17RAQ96F46 866 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
LINC02409-201ENST00000547515 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
LINC02409-201ENST00000547515 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
LINC02409-201ENST00000547515 ZHX1Q9UKY1 873 aaPredicted RBP11.88□□□□□ -0.51
LINC02409-201ENST00000547515 FAM184BQ9ULE4 1060 aa11.88□□□□□ -0.51
LINC02409-201ENST00000547515 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 GOLGA8AA7E2F4 631 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 RARBP10826 455 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 COL6A1P12109 1028 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 FUT2Q10981 343 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 CMTR1Q8N1G2 835 aaKnown RBP11.87□□□□□ -0.51
LINC02409-201ENST00000547515 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 COL20A1Q9P218 1284 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
LINC02409-201ENST00000547515 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
LINC02409-201ENST00000547515 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
LINC02409-201ENST00000547515 B4DLN1 442 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 DNM1LO00429 736 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 ADCY6O43306 1168 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 DUSP11O75319 330 aaKnown RBP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 SEC24BO95487 1268 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 CFBP00751 764 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 CDC27P30260 824 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 METAP2P50579 478 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 TOB2Q14106 344 aaPredicted RBP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 LRRC41Q15345 812 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 TAPT1Q6NXT6 567 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 PIBF1Q8WXW3 757 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 TAAR1Q96RJ0 339 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
LINC02409-201ENST00000547515 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
LINC02409-201ENST00000547515 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 RBM47A0AV96 593 aaKnown RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 ADAMTS4O75173 837 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 NKX3-2P78367 333 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 IQSEC1Q6DN90 963 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 LENG1Q96BZ8 264 aaPredicted RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 IWS1Q96ST2 819 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 RMDN3Q96TC7 470 aa11.85□□□□□ -0.51
LINC02409-201ENST00000547515 UPF3AQ9H1J1 476 aaKnown RBP11.85□□□□□ -0.51
LINC02409-201ENST00000547515 PDGFCQ9NRA1 345 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms