RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 METAP2P50579 478 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC7-226ENST00000547259 EVCP57679 992 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 KLRC3Q07444 240 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 STK3Q13188 491 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 RASGRP2Q7LDG7 609 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-226ENST00000547259 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 CTCFLQ8NI51 663 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-226ENST00000547259 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 SEMA6BQ9H3T3 888 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
HDAC7-226ENST00000547259 NID2Q14112 1375 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 LARGE1O95461 756 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 PGK2P07205 417 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 PDHBP11177 359 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 SLC1A4P43007 532 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 RCAN1P53805 252 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 TROAPQ12815 778 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 GRM4Q14833 912 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 RTN1Q16799 776 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 ZNF274Q96GC6 653 aaPredicted RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 GMCL1Q96IK5 515 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 ZSCAN31Q96LW9 406 aaPredicted RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 SLKQ9H2G2 1235 aaPredicted RBP14□□□□□ -0.17
HDAC7-226ENST00000547259 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 TTC28Q96AY4 2481 aa14□□□□□ -0.17
HDAC7-226ENST00000547259 ELP1O95163 1332 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 A0A1W2PQ45 241 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 A0A1W2PQY0 241 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 TRIM43BA6NCK2 446 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 DUSP11O75319 330 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 PGK1P00558 417 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 ZNF865P0CJ78 1059 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 BMP3P12645 472 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 PDIA3P30101 505 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 KIF5BP33176 963 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 OAZ1P54368 228 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 FPGSQ05932 587 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 C9orf50Q5SZB4 431 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 ANKRD33Q7Z3H0 272 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 CHST13Q8NET6 341 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 SNX21Q969T3 373 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 TRIM43Q96BQ3 446 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
HDAC7-226ENST00000547259 FEM1BQ9UK73 627 aa13.99□□□□□ -0.17
HDAC7-226ENST00000547259 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 PFKFB2O60825 505 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 SNHG28P0DPA3 235 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 ACLYP53396 1101 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 CCT2P78371 535 aaKnown RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 IKQ13123 557 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 ME3Q16798 604 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 ANKRD35Q8N283 1001 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 MAFAQ8NHW3 353 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 GPCPD1Q9NPB8 672 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 SH2B1Q9NRF2 756 aaPredicted RBP13.98□□□□□ -0.17
HDAC7-226ENST00000547259 NCOR1O75376 2440 aa13.98□□□□□ -0.17
HDAC7-226ENST00000547259 DNAJC25-GNG10A0A024R161 153 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 K7ELQ4 463 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-226ENST00000547259 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 CST5P28325 142 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-226ENST00000547259 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 BECN1Q14457 450 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 KLHDC9Q8NEP7 349 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
HDAC7-226ENST00000547259 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-226ENST00000547259 SEZ6LQ9BYH1 1024 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 NCOA5Q9HCD5 579 aaKnown RBP13.97□□□□□ -0.17
HDAC7-226ENST00000547259 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
HDAC7-226ENST00000547259 PRUNE2Q8WUY3 3088 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms