RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 VCPKMTQ9H867 229 aa6.95□□□□□ -1.3
PFDN5-205ENST00000547228 FBXO40Q9UH90 709 aa6.95□□□□□ -1.3
PFDN5-205ENST00000547228 TMX2Q9Y320 296 aa6.95□□□□□ -1.3
PFDN5-205ENST00000547228 PTPRFP10586 1907 aa6.95□□□□□ -1.3
PFDN5-205ENST00000547228 DYNC1LI2O43237 492 aaPredicted RBP6.94□□□□□ -1.3
PFDN5-205ENST00000547228 NCK2O43639 380 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 ZBED4O75132 1171 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 SLC4A3P48751 1232 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 PLCD1P51178 756 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
PFDN5-205ENST00000547228 BEX3Q00994 111 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 ICA1Q05084 483 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 BFSP2Q13515 415 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 IQSEC1Q6DN90 963 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 EP400NLQ6ZTU2 488 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 BMP8AQ7Z5Y6 402 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 ADHFE1Q8IWW8 467 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 MIGA1Q8NAN2 632 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 FAM212AQ96EL1 285 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 CCDC17Q96LX7 622 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 TGS1Q96RS0 853 aaKnown RBP6.94□□□□□ -1.3
PFDN5-205ENST00000547228 PHOX2BQ99453 314 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 RAD9AQ99638 391 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 ALDH8A1Q9H2A2 487 aaPredicted RBP6.94□□□□□ -1.3
PFDN5-205ENST00000547228 GPHNQ9NQX3 736 aaPredicted RBP6.94□□□□□ -1.3
PFDN5-205ENST00000547228 SWAP70Q9UH65 585 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 Q9Y3F1 56 aa6.94□□□□□ -1.3
PFDN5-205ENST00000547228 DNAJC25-GNG10A0A024R161 153 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 TLDC2A0PJX2 215 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ASB14A6NK59 587 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 USP17L21D6R901 530 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 SH3BP5O60239 455 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 PPP1R37O75864 691 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 IDH1O75874 414 aaKnown RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 CYP2E1P05181 493 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 GNAI3P08754 354 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ERVK-21P61565 698 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 IRX5P78411 483 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 BRDTQ58F21 947 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ARMCX2Q7L311 632 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 TLK2Q86UE8 772 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 CCDC144CPQ8IYA2 1237 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 PRPF38AQ8NAV1 312 aaKnown RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 NEK9Q8TD19 979 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 EDAQ92838 391 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ATOH1Q92858 354 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ZNF512BQ96KM6 892 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 MFRPQ9BY79 579 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 LNPKQ9C0E8 428 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 SUGCTQ9HAC7 445 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 POLR3EQ9NVU0 708 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 MCM9Q9NXL9 1143 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 ZNF214Q9UL59 606 aaPredicted RBP6.93□□□□□ -1.3
PFDN5-205ENST00000547228 MTUS1Q9ULD2 1270 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 PPP1R9AQ9ULJ8 1098 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 TNKSO95271 1327 aa6.93□□□□□ -1.3
PFDN5-205ENST00000547228 PIEZO1Q92508 2521 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 ATP2A1O14983 1001 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 CTAGE5O15320 804 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 EFCAB14O75071 495 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 IQCF3P0C7M6 154 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 PRR29P0C7W0 189 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 CYP2C9P11712 490 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 PSMC6P62333 389 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 ZP2Q05996 745 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 GABPAQ06546 454 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 FOXD4Q12950 439 aaPredicted RBP6.92□□□□□ -1.3
PFDN5-205ENST00000547228 MFSD10Q14728 455 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
PFDN5-205ENST00000547228 HERC4Q5GLZ8 1057 aaPredicted RBP6.92□□□□□ -1.3
PFDN5-205ENST00000547228 KIAA1755Q5JYT7 1200 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 EGFLAMQ63HQ2 1017 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 SIAH1Q8IUQ4 282 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 PRSS33Q8NF86 280 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 GDPD5Q8WTR4 605 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 PMM1Q92871 262 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 KCNB2Q92953 911 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 MRPL38Q96DV4 380 aaKnown RBP6.92□□□□□ -1.3
PFDN5-205ENST00000547228 SPOCK3Q9BQ16 436 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 CRNKL1Q9BZJ0 848 aaKnown RBP6.92□□□□□ -1.3
PFDN5-205ENST00000547228 SMC4Q9NTJ3 1288 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 GRIN2DO15399 1336 aa6.92□□□□□ -1.3
PFDN5-205ENST00000547228 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
PFDN5-205ENST00000547228 H3BQ06 376 aaPredicted RBP6.91□□□□□ -1.3
PFDN5-205ENST00000547228 ADCY6O43306 1168 aa6.91□□□□□ -1.3
PFDN5-205ENST00000547228 KPNA6O60684 536 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms