RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
BEST3-208ENST00000547208 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 ASGR1P07306 291 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 TNFAIP2Q03169 654 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
BEST3-208ENST00000547208 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
BEST3-208ENST00000547208 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 ANKRD33Q7Z3H0 272 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 ADGRF4Q8IZF3 695 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 STAG2Q8N3U4 1231 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 SENP2Q9HC62 589 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 VTA1Q9NP79 307 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
BEST3-208ENST00000547208 STARD7Q9NQZ5 370 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 ELP1O95163 1332 aa12.06□□□□□ -0.48
BEST3-208ENST00000547208 E7EWF7 191 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 PQBP1O60828 265 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 CLTBP09497 229 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 EDNRBP24530 442 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 CALML3P27482 149 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 CDK7P50613 346 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 BEX3Q00994 111 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 FAAP100Q0VG06 881 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 USH1GQ495M9 461 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 TLK2Q86UE8 772 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 PCSK9Q8NBP7 692 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 BADQ92934 168 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 TOX2Q96NM4 488 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 LBHD1Q9BQE6 289 aaPredicted RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 ADD3Q9UEY8 706 aaKnown RBP12.05□□□□□ -0.48
BEST3-208ENST00000547208 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 STXBP5LQ9Y2K9 1186 aa12.05□□□□□ -0.48
BEST3-208ENST00000547208 GBF1Q92538 1859 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
BEST3-208ENST00000547208 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
BEST3-208ENST00000547208 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
BEST3-208ENST00000547208 ANTXR2P58335 489 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 IQSEC1Q6DN90 963 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 MTMR8Q96EF0 704 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 GLT1D1Q96MS3 346 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
BEST3-208ENST00000547208 SPC25Q9HBM1 224 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 COL20A1Q9P218 1284 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 RAPGEFL1Q9UHV5 662 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 Q9Y3F1 56 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
BEST3-208ENST00000547208 ABCB11O95342 1321 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 DOCK5Q9H7D0 1870 aa12.04□□□□□ -0.48
BEST3-208ENST00000547208 OPLAHO14841 1288 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 TRDNQ13061 729 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
BEST3-208ENST00000547208 FSCN1Q16658 493 aaKnown RBP12.03□□□□□ -0.48
BEST3-208ENST00000547208 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
BEST3-208ENST00000547208 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 DNERQ8NFT8 737 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 MAF1Q9H063 256 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 TANC1Q9C0D5 1861 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
BEST3-208ENST00000547208 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.49
BEST3-208ENST00000547208 KLRF2D3W0D1 207 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 ARVCFO00192 962 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 DYNC1LI2O43237 492 aaPredicted RBP12.02□□□□□ -0.49
BEST3-208ENST00000547208 EPHB4P54760 987 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 GHRHRQ02643 423 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 TROAPQ12815 778 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 GRM4Q14833 912 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 SHHQ15465 462 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 CXCL17Q6UXB2 119 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 NOL8Q76FK4 1167 aaKnown RBP12.02□□□□□ -0.49
BEST3-208ENST00000547208 CENPQQ7L2Z9 268 aaPredicted RBP12.02□□□□□ -0.49
BEST3-208ENST00000547208 CHST3Q7LGC8 479 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms