RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 KRT32Q14532 448 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 IQSEC1Q6DN90 963 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 SLC39A5Q6ZMH5 540 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 NFXL1Q6ZNB6 911 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 KLHDC9Q8NEP7 349 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
CCDC38-205ENST00000546947 UPF3AQ9H1J1 476 aaKnown RBP17.17■□□□□ 0.34
CCDC38-205ENST00000546947 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
CCDC38-205ENST00000546947 MOXD2PA6NHM9 499 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 KIF5BP33176 963 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 NKX3-2P78367 333 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 SNX17Q15036 470 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 C1orf53Q5VUE5 145 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 TAPT1Q6NXT6 567 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 FBXO16Q8IX29 292 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-205ENST00000546947 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
CCDC38-205ENST00000546947 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-205ENST00000546947 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
CCDC38-205ENST00000546947 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
CCDC38-205ENST00000546947 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 CYTH3O43739 400 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 C6orf222P0C671 652 aaPredicted RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 CALM1P0DP23 149 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 CALM2P0DP24 149 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 CALM3P0DP25 149 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 EDNRBP24530 442 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 GNAQP50148 359 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 RTP1P59025 263 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 EEPD1Q7L9B9 569 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 HOMER1Q86YM7 354 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 PCSK9Q8NBP7 692 aaKnown RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 PIGSQ96S52 555 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 MAP3K20Q9NYL2 800 aaKnown RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 ZMYND8Q9ULU4 1186 aaPredicted RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 GNEQ9Y223 722 aaKnown RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 Q9Y3F1 56 aa17.15■□□□□ 0.34
CCDC38-205ENST00000546947 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
CCDC38-205ENST00000546947 KIAA1217Q5T5P2 1943 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 PNMA6FA0A0J9YX94 578 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 A0A1W2PQ45 241 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 A0A1W2PQY0 241 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 PPP1R11O60927 126 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 REC8O95072 547 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 GHRHRQ02643 423 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 PDE4DQ08499 809 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 KCNA10Q16322 511 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 DHX32Q7L7V1 743 aaKnown RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 TLK2Q86UE8 772 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 SGMS1Q86VZ5 419 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 SYTL5Q8TDW5 730 aaPredicted RBP17.14■□□□□ 0.33
CCDC38-205ENST00000546947 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 KCNB2Q92953 911 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 PDGFCQ9NRA1 345 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 SLC12A7Q9Y666 1083 aa17.14■□□□□ 0.33
CCDC38-205ENST00000546947 RBM47A0AV96 593 aaKnown RBP17.13■□□□□ 0.33
CCDC38-205ENST00000546947 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
CCDC38-205ENST00000546947 SMPD1P17405 629 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 SYN1P17600 705 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 ACLYP53396 1101 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
CCDC38-205ENST00000546947 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
CCDC38-205ENST00000546947 TAAR1Q96RJ0 339 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 LRRC2Q9BYS8 371 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 PRO3102Q9H379 93 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 ATP11BQ9Y2G3 1177 aa17.13■□□□□ 0.33
CCDC38-205ENST00000546947 OPLAHO14841 1288 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
CCDC38-205ENST00000546947 CFBP00751 764 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 ASGR1P07306 291 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 HSPA4P34932 840 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 HSD17B4P51659 736 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 DUSP28Q4G0W2 176 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 SYNE3Q6ZMZ3 975 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 IWS1Q96ST2 819 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 GDF15Q99988 308 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 COL20A1Q9P218 1284 aa17.12■□□□□ 0.33
CCDC38-205ENST00000546947 RBM27Q9P2N5 1060 aaKnown RBP17.12■□□□□ 0.33
CCDC38-205ENST00000546947 CTAGE5O15320 804 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms