RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PFKFB2O60825 505 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 GJB1P08034 283 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 TAL1P17542 331 aaPredicted RBP16.72■□□□□ 0.27
DDX54-203ENST00000546869 CYP2C19P33261 490 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 TRIM32Q13049 653 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 RABEP1Q15276 862 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 MTFR1Q15390 333 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
DDX54-203ENST00000546869 RNF208Q9H0X6 261 aa16.72■□□□□ 0.27
DDX54-203ENST00000546869 ZNFX1Q9P2E3 1918 aaKnown RBP16.71■□□□□ 0.27
DDX54-203ENST00000546869 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
DDX54-203ENST00000546869 B4DLN1 442 aa16.71■□□□□ 0.27
DDX54-203ENST00000546869 SNAI1O95863 264 aaPredicted RBP16.71■□□□□ 0.27
DDX54-203ENST00000546869 CYBAP13498 195 aa16.71■□□□□ 0.27
DDX54-203ENST00000546869 MRPL12P52815 198 aaKnown RBP16.71■□□□□ 0.27
DDX54-203ENST00000546869 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
DDX54-203ENST00000546869 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
DDX54-203ENST00000546869 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
DDX54-203ENST00000546869 HTTP42858 3142 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 PIK3CDO00329 1044 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 MSCO60682 206 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 CALML3P27482 149 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
DDX54-203ENST00000546869 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
DDX54-203ENST00000546869 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
DDX54-203ENST00000546869 SLC30A10Q6XR72 485 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 MPHOSPH6Q99547 160 aaKnown RBP16.7■□□□□ 0.26
DDX54-203ENST00000546869 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX54-203ENST00000546869 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
DDX54-203ENST00000546869 ABHD16BQ9H3Z7 469 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 ASTN1O14525 1302 aa16.7■□□□□ 0.26
DDX54-203ENST00000546869 SMCHD1A6NHR9 2005 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 SGPL1O95470 568 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 CFBP00751 764 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 EDNRBP24530 442 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 GJA8P48165 433 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 ALDH5A1P51649 535 aaPredicted RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 SCRN1Q12765 414 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 TRPV1Q8NER1 839 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 NSUN6Q8TEA1 469 aaKnown RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.69■□□□□ 0.26
DDX54-203ENST00000546869 BARHL2Q9NY43 387 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
DDX54-203ENST00000546869 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 CPLX1O14810 134 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 SEPT4O43236 478 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 CDKL5O76039 1030 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 SCG2P13521 617 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
DDX54-203ENST00000546869 PKN1Q16512 942 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 ME3Q16798 604 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 LHX8Q68G74 356 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 FAM177A1Q8N128 213 aaPredicted RBP16.68■□□□□ 0.26
DDX54-203ENST00000546869 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
DDX54-203ENST00000546869 KATNBL1Q9H079 304 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 PSTPIP2Q9H939 334 aa16.68■□□□□ 0.26
DDX54-203ENST00000546869 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
DDX54-203ENST00000546869 MEIS2O14770 477 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 CCND3P30281 292 aaPredicted RBP16.67■□□□□ 0.26
DDX54-203ENST00000546869 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
DDX54-203ENST00000546869 STK3Q13188 491 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 ACVR2BQ13705 512 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 TRIM22Q8IYM9 498 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
DDX54-203ENST00000546869 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
DDX54-203ENST00000546869 TAAR1Q96RJ0 339 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
DDX54-203ENST00000546869 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 STXBP3O00186 592 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 ST18O60284 1047 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 DEXIO95424 95 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 RGS19P49795 217 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 PRAMEF19Q5SWL8 479 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
DDX54-203ENST00000546869 CUL5Q93034 780 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 PHKBQ93100 1093 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 DEFB118Q96PH6 123 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 RMDN3Q96TC7 470 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 SLC26A6Q9BXS9 759 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 VTA1Q9NP79 307 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 RIC8AQ9NPQ8 531 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
DDX54-203ENST00000546869 OGDHLQ9ULD0 1010 aa16.66■□□□□ 0.26
DDX54-203ENST00000546869 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms