RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TMED8Q6PL24 325 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-212ENST00000546744 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 TAF5LO75529 589 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 PSMD7P51665 324 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 USP14P54578 494 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 CRYMQ14894 314 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 FMO2Q99518 471 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 EPS15L1Q9UBC2 864 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 PNPLA6Q8IY17 1366 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 ATF2P15336 505 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 RXRAP19793 462 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 SCRN1Q12765 414 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 ZNF658Q5TYW1 1059 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-212ENST00000546744 LSM14BQ9BX40 385 aaKnown RBP13.98□□□□□ -0.17
PTCH1-212ENST00000546744 ALDH8A1Q9H2A2 487 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-212ENST00000546744 NLRC4Q9NPP4 1024 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 DENND2AQ9ULE3 1009 aa13.98□□□□□ -0.17
PTCH1-212ENST00000546744 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 GRID2IPA4D2P6 1211 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SPDL1Q96EA4 605 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 MPHOSPH6Q99547 160 aaKnown RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 FAM96AQ9H5X1 160 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 GCFC2P16383 781 aaKnown RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SOS2Q07890 1332 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 BIRC2Q13490 618 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SCYL3Q8IZE3 742 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 PODXLO00592 558 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 RASGRF2O14827 1237 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SMTNP53814 917 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 RWDD2BP57060 319 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 DHX9Q08211 1270 aaKnown RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 ABCC12Q96J65 1359 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
PTCH1-212ENST00000546744 RNF26Q9BY78 433 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-212ENST00000546744 USP32Q8NFA0 1604 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-212ENST00000546744 SLC8A3P57103 927 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 EHHADHQ08426 723 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 PDCLQ13371 301 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 PHKBQ93100 1093 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 DPH5Q9H2P9 285 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 KIF23Q02241 960 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-212ENST00000546744 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
PTCH1-212ENST00000546744 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
PTCH1-212ENST00000546744 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 NOVA2Q9UNW9 492 aaKnown RBP13.96□□□□□ -0.17
PTCH1-212ENST00000546744 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
PTCH1-212ENST00000546744 PPP1R37O75864 691 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 ADCY8P40145 1251 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 CCDC92Q53HC0 331 aaPredicted RBP13.96□□□□□ -0.18
PTCH1-212ENST00000546744 NLRP14Q86W24 1093 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 U2AF1L4Q8WU68 220 aaKnown RBP13.96□□□□□ -0.18
PTCH1-212ENST00000546744 TRIM11Q96F44 468 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 DCAF5Q96JK2 942 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 MAN1B1Q9UKM7 699 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 NRXN3Q9Y4C0 1643 aa13.96□□□□□ -0.18
PTCH1-212ENST00000546744 LOC102724159A0A0B4J2E5 919 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 ZPR1O75312 459 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 SESN3P58005 492 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 PWP2Q15269 919 aaKnown RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 PALM2Q8IXS6 379 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 CCDC89Q8N998 374 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 ZC3H15Q8WU90 426 aaKnown RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 MED23Q9ULK4 1368 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 HGSO14964 777 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 GPTP24298 496 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 NRBF2Q96F24 287 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 CNOT6LQ96LI5 555 aaKnown RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 PACSIN2Q9UNF0 486 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 HSPD1P10809 573 aaKnown RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 PPP2R2AP63151 447 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 GCKRQ14397 625 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 CCT6BQ92526 530 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 MAGOHBQ96A72 148 aaKnown RBP13.95□□□□□ -0.18
PTCH1-212ENST00000546744 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 KDRP35968 1356 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 RFX7Q2KHR2 1363 aa13.95□□□□□ -0.18
PTCH1-212ENST00000546744 ENC1O14682 589 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 MRPS35P82673 323 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 CUL3Q13618 768 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 CALCRLQ16602 461 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms