RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TBC1D10CQ8IV04 446 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 DYNLL2Q96FJ2 89 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 ZIC5Q96T25 663 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 ZMYND15Q9H091 742 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 SWAP70Q9UH65 585 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 CTNNA3Q9UI47 895 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 ANAPC4Q9UJX5 808 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 PCDHGC4Q9Y5F7 938 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 RBM8AQ9Y5S9 174 aaKnown RBP7.5□□□□□ -1.21
PRKDC-211ENST00000546304 CSADQ9Y600 493 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 NEDD4P46934 1319 aa7.5□□□□□ -1.21
PRKDC-211ENST00000546304 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 EML1O00423 815 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 USP2O75604 605 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 GDF11O95390 407 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 HSPA6P17066 643 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 TXLNAP40222 546 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SEC13P55735 322 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 PSMA6P60900 246 aaKnown RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SHROOM1Q2M3G4 852 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 C8orf34Q49A92 452 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 LDLRAD1Q5T700 205 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 FOXP4Q8IVH2 680 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ANKRD13AQ8IZ07 590 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 STAG1Q8WVM7 1258 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 MAP4K1Q92918 833 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ZKSCAN4Q969J2 545 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ABHD17AQ96GS6 310 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 HHIPL1Q96JK4 782 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 CLMNQ96JQ2 1002 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ZCCHC2Q9C0B9 1178 aaKnown RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 RNF41Q9H4P4 317 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ZNF287Q9HBT7 754 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 ZBTB21Q9ULJ3 1066 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.49□□□□□ -1.21
PRKDC-211ENST00000546304 SNCAIPQ9Y6H5 919 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 PARP14Q460N5 1801 aa7.49□□□□□ -1.21
PRKDC-211ENST00000546304 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 RASSF10A6NK89 507 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ZNF213O14771 459 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ORC4O43929 436 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 CTNND1O60716 968 aaKnown RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 EIF5BO60841 1220 aaKnown RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 PRDM1O75626 825 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 GH2P01242 217 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ASNSP08243 561 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 CYP21A2P08686 494 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 PCP11498 1178 aaKnown RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 CAP2P40123 477 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 CDK8P49336 464 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 PDE4BQ07343 736 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 RRP1BQ14684 758 aaKnown RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 CERKLQ49MI3 558 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 TATDN1Q6P1N9 297 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 RASAL3Q86YV0 1011 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 STK11IPQ8N1F8 1099 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ACDQ96AP0 544 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ELP3Q9H9T3 547 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-211ENST00000546304 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 MPHOSPH10O00566 681 aaKnown RBP7.47□□□□□ -1.21
PRKDC-211ENST00000546304 SLC27A2O14975 620 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 EPB41L2O43491 1005 aaKnown RBP7.47□□□□□ -1.21
PRKDC-211ENST00000546304 BCRP11274 1271 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 AKR1B1P15121 316 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 FGFR3P22607 806 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 HTRA3P83110 453 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 ABCB5Q2M3G0 1257 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 RRP12Q5JTH9 1297 aaKnown RBP7.47□□□□□ -1.21
PRKDC-211ENST00000546304 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 CREB3L3Q68CJ9 461 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 RGMBQ6NW40 437 aa7.47□□□□□ -1.21
PRKDC-211ENST00000546304 MFSD6Q6ZSS7 791 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms