RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TRPV6Q9H1D0 765 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 HIPK3Q9H422 1215 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 PRDM6Q9NQX0 595 aa14.85□□□□□ -0.03
COPS7A-221ENST00000546229 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
COPS7A-221ENST00000546229 TLR3O15455 904 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 RANBP6O60518 1105 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 HSPD1P10809 573 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 PURAQ00577 322 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 IKQ13123 557 aaPredicted RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 BAATQ14032 418 aaPredicted RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 NSMFQ6X4W1 530 aa14.84□□□□□ -0.03
COPS7A-221ENST00000546229 TICAM2Q86XR7 235 aa14.84□□□□□ -0.03
COPS7A-221ENST00000546229 ALDH8A1Q9H2A2 487 aaPredicted RBP14.84□□□□□ -0.03
COPS7A-221ENST00000546229 DYNC1LI2O43237 492 aaPredicted RBP14.83□□□□□ -0.04
COPS7A-221ENST00000546229 ZNF543Q08ER8 600 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 CCDC96Q2M329 555 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 CRBNQ96SW2 442 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 SEZ6LQ9BYH1 1024 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 NEDD4P46934 1319 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 FRMPD2Q68DX3 1309 aaPredicted RBP14.83□□□□□ -0.04
COPS7A-221ENST00000546229 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.04
COPS7A-221ENST00000546229 NMIQ13287 307 aaPredicted RBP14.82□□□□□ -0.04
COPS7A-221ENST00000546229 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
COPS7A-221ENST00000546229 VTI1AQ96AJ9 217 aa14.82□□□□□ -0.04
COPS7A-221ENST00000546229 PRDM12Q9H4Q4 367 aa14.82□□□□□ -0.04
COPS7A-221ENST00000546229 ISY1Q9ULR0 285 aaKnown RBP14.82□□□□□ -0.04
COPS7A-221ENST00000546229 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
COPS7A-221ENST00000546229 COL4A4P53420 1690 aaPredicted RBP14.81□□□□□ -0.04
COPS7A-221ENST00000546229 CCL23P55773 120 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 MCMDC2Q4G0Z9 681 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 TRMT13Q9NUP7 481 aaKnown RBP14.81□□□□□ -0.04
COPS7A-221ENST00000546229 MTMR7Q9Y216 660 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 KIAA1217Q5T5P2 1943 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 TET1Q8NFU7 2136 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
COPS7A-221ENST00000546229 NCOR1O75376 2440 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 ARIH2O95376 493 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 HAND2P61296 217 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 RPS6P62753 249 aaKnown RBP14.8□□□□□ -0.04
COPS7A-221ENST00000546229 RAB30Q15771 203 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 TJAP1Q5JTD0 557 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
COPS7A-221ENST00000546229 OTOP2Q7RTS6 562 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 SCLYQ96I15 445 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 WDR11Q9BZH6 1224 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 NKX2-4Q9H2Z4 354 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 GPCPD1Q9NPB8 672 aa14.8□□□□□ -0.04
COPS7A-221ENST00000546229 A6NJR5 290 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 TNKSO95271 1327 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 FGBP02675 491 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 CYP2C9P11712 490 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 TTLL4Q14679 1199 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 SMC5Q8IY18 1101 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 COPS5Q92905 334 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 CPVLQ9H3G5 476 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 COL20A1Q9P218 1284 aa14.79□□□□□ -0.04
COPS7A-221ENST00000546229 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
COPS7A-221ENST00000546229 ZEB2O60315 1214 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 ARHGEF15O94989 841 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
COPS7A-221ENST00000546229 MYOGP15173 224 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 RABGGTBP53611 331 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 RRP12Q5JTH9 1297 aaKnown RBP14.78□□□□□ -0.04
COPS7A-221ENST00000546229 CCDC62Q6P9F0 684 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 DNERQ8NFT8 737 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 PPP1R13LQ8WUF5 828 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 TTC14Q96N46 770 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
COPS7A-221ENST00000546229 PTPDC1A2A3K4 754 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 CALML3P27482 149 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 CPT1AP50416 773 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 GPNMBQ14956 572 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 NBPF20Q3BBV1 942 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 RNF207Q6ZRF8 634 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 RGS22Q8NE09 1264 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 ANKS1AQ92625 1134 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 MTG1Q9BT17 334 aaPredicted RBP14.77□□□□□ -0.05
COPS7A-221ENST00000546229 OSBPL3Q9H4L5 887 aa14.77□□□□□ -0.05
COPS7A-221ENST00000546229 MYH6P13533 1939 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 RBAK-RBAKDNI3L0D1 243 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 OPLAHO14841 1288 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 NKRFO15226 690 aaKnown RBP eCLIP14.76□□□□□ -0.05
COPS7A-221ENST00000546229 PFKMP08237 780 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 NFRKBQ6P4R8 1299 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 SYMPKQ92797 1274 aaKnown RBP14.76□□□□□ -0.05
COPS7A-221ENST00000546229 GAS2L1Q99501 681 aaPredicted RBP14.76□□□□□ -0.05
COPS7A-221ENST00000546229 LNPKQ9C0E8 428 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 IL25Q9H293 177 aa14.76□□□□□ -0.05
COPS7A-221ENST00000546229 MSRAQ9UJ68 235 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms