RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-225	ENST00000545930	RASSF10	A6NK89	507 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	ZBTB5	O15062	677 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	PLEKHA8P1	O95397	391 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	GJB2	P29033	226 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	NOG	Q13253	232 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	CCL15	Q16663	113 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	ANKRD23	Q86SG2	305 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	NBPF11	Q86T75	865 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	RASAL3	Q86YV0	1011 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	KIFC2	Q96AC6	838 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	NUP88	Q99567	741 aa	Predicted RBP	11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	GLT8D2	Q9H1C3	349 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	JMJD4	Q9H9V9	463 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	PPP1R9A	Q9ULJ8	1098 aa		11.2	□□□□□ -0.62
DDB1-225	ENST00000545930	PTPRF	P10586	1907 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	CNTNAP5	Q8WYK1	1306 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	TLL1	O43897	1013 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	CTDNEP1	O95476	244 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	SLC16A2	P36021	539 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	GJA5	P36382	358 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	FUT2	Q10981	343 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	KIAA1755	Q5JYT7	1200 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	LARP1B	Q659C4	914 aa	Known RBP	11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	TTBK2	Q6IQ55	1244 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	LBX2	Q6XYB7	198 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	TEX2	Q8IWB9	1127 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	CCDC148	Q8NFR7	591 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	PHKB	Q93100	1093 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	MTMR8	Q96EF0	704 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	MAF1	Q9H063	256 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	SH3GLB2	Q9NR46	395 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR12	Q9ULL5	1215 aa		11.19	□□□□□ -0.62
DDB1-225	ENST00000545930		H3BQV1	296 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	CYTH3	O43739	400 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	ALDH1A1	P00352	501 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	SCG2	P13521	617 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	OAZ1	P54368	228 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR20E	P86478	221 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR20C	P86479	221 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR20D	P86480	221 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR20B	P86481	221 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PRR20A	P86496	221 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PFKFB3	Q16875	520 aa	Predicted RBP	11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	GALNT17	Q6IS24	598 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	METTL3	Q86U44	580 aa	Known RBP	11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	FBXO11	Q86XK2	927 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	HOMER1	Q86YM7	354 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	CMTR1	Q8N1G2	835 aa	Known RBP	11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	DDX11	Q96FC9	970 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PIGS	Q96S52	555 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	ALG1	Q9BT22	464 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	AMN	Q9BXJ7	453 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	BRMS1	Q9HCU9	246 aa		11.18	□□□□□ -0.62
DDB1-225	ENST00000545930	PDHX	O00330	501 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	JAK2	O60674	1132 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	FDPS	P14324	419 aa	Known RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	CALML3	P27482	149 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	GNA11	P29992	359 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	COPB2	P35606	906 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	TM4SF4	P48230	202 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	GCLC	P48506	637 aa	Predicted RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	NUCB2	P80303	420 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	ST3GAL1	Q11201	340 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	MOGS	Q13724	837 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	SAFB	Q15424	915 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	CDC37	Q16543	378 aa	Predicted RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	TREML2	Q5T2D2	321 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	MCTP2	Q6DN12	878 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	GPAT2	Q6NUI2	795 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	ZNF598	Q86UK7	904 aa	Known RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	SAMD3	Q8N6K7	520 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	BICD2	Q8TD16	824 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	C8orf76	Q96K31	380 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	RANBP17	Q9H2T7	1088 aa	Known RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	SLC38A10	Q9HBR0	1119 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	C6orf50	Q9HD87	102 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	BARHL2	Q9NY43	387 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	ADAMTS5	Q9UNA0	930 aa		11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	MRPL11	Q9Y3B7	192 aa	Known RBP	11.17	□□□□□ -0.62
DDB1-225	ENST00000545930	LOC285556	D6RIA3	1793 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	FAM155A	B1AL88	458 aa	Predicted RBP	11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	BTBD19	C9JJ37	291 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	VWA5A	O00534	786 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	ATP2A1	O14983	1001 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	S1PR4	O95977	384 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	ICAM1	P05362	532 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	MAP2K2	P36507	400 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	NLRP5	P59047	1200 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	PKN1	Q16512	942 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	QRICH1	Q2TAL8	776 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	TKFC	Q3LXA3	575 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	PIBF1	Q8WXW3	757 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	BRI3BP	Q8WY22	251 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	CAPNS2	Q96L46	248 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	PARK7	Q99497	189 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	FBXO28	Q9NVF7	368 aa		11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	MAP3K20	Q9NYL2	800 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-225	ENST00000545930	RABGAP1	Q9Y3P9	1069 aa		11.16	□□□□□ -0.62

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