RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TRIM9Q9C026 710 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 TMEM60Q9H2L4 133 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 TCP11L1Q9NUJ3 509 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 BSDC1Q9NW68 430 aaPredicted RBP9.75□□□□□ -0.85
TDP1-204ENST00000545686 PCDHA6Q9UN73 950 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 TFR2Q9UP52 801 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 HYOU1Q9Y4L1 999 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 PCDHA8Q9Y5H6 950 aa9.75□□□□□ -0.85
TDP1-204ENST00000545686 ATXN2Q99700 1313 aaKnown RBP9.75□□□□□ -0.85
TDP1-204ENST00000545686 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 A0A087WUV0 522 aaPredicted RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 MACROD2A1Z1Q3 448 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 ZNF185O15231 689 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 PJA2O43164 708 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 PDE4DQ08499 809 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 CCDC96Q2M329 555 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 FOXR2Q6PJQ5 311 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 CABP7Q86V35 215 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 CAVIN3Q969G5 261 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 IFIH1Q9BYX4 1025 aaKnown RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 BARHL2Q9NY43 387 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 LRWD1Q9UFC0 647 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
TDP1-204ENST00000545686 COL24A1Q17RW2 1714 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 PP2D1A8MPX8 630 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 ZNF263O14978 683 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 OR52Z1P0C646 297 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 VEGFAP15692 232 aaPredicted RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 PLCG1P19174 1290 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 SF3B3Q15393 1217 aaKnown RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 GLE1Q53GS7 698 aaKnown RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 FAM47AQ5JRC9 791 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 ANKRD40Q6AI12 368 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 TADA2BQ86TJ2 420 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 CCDC84Q86UT8 332 aaPredicted RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.852e-6■■■□□ 15.9
TDP1-204ENST00000545686 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 LZTS2Q9BRK4 669 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 ZNF652Q9Y2D9 606 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 PCDHA13Q9Y5I0 950 aa9.74□□□□□ -0.85
TDP1-204ENST00000545686 DDX60LQ5H9U9 1706 aaKnown RBP9.74□□□□□ -0.85
TDP1-204ENST00000545686 EIF3HO15372 352 aaKnown RBP eCLIP9.73□□□□□ -0.85
TDP1-204ENST00000545686 FGFR1OPO95684 399 aaKnown RBP9.73□□□□□ -0.85
TDP1-204ENST00000545686 IRAK1P51617 712 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 KIF11P52732 1056 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 SKOR1P84550 965 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 APBA1Q02410 837 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 MECOMQ03112 1051 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 ICE2Q659A1 982 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 FBXO33Q7Z6M2 555 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 GSPT2Q8IYD1 628 aaKnown RBP9.73□□□□□ -0.85
TDP1-204ENST00000545686 SPATA4Q8NEY3 305 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 FAM84BQ96KN1 310 aaPredicted RBP9.73□□□□□ -0.85
TDP1-204ENST00000545686 OSBPL9Q96SU4 736 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 STIM2Q9P246 746 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 RNF14Q9UBS8 474 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 SIK3Q9Y2K2 1263 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 CAPN6Q9Y6Q1 641 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 STXBP3O00186 592 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 EBAG9O00559 213 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 ZMYND10O75800 440 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
TDP1-204ENST00000545686 KLK7P49862 253 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 ASIC1P78348 528 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 CYP27A1Q02318 531 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 MAN2A1Q16706 1144 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 INF2Q27J81 1249 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 VWA3BQ502W6 1294 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 CENPPQ6IPU0 288 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 TYW1BQ6NUM6 668 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.85
TDP1-204ENST00000545686 KRT25Q7Z3Z0 450 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 RASGRP4Q8TDF6 673 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 LRRC15Q8TF66 581 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 CAPS2Q9BXY5 557 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 SLAIN2Q9P270 581 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 DUSP10Q9Y6W6 482 aa9.73□□□□□ -0.85
TDP1-204ENST00000545686 GRIN2DO15399 1336 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 STK4Q13043 487 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
TDP1-204ENST00000545686 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
TDP1-204ENST00000545686 ARHGAP20Q9P2F6 1191 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 MAD2L2Q9UI95 211 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 NHSQ6T4R5 1651 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
TDP1-204ENST00000545686 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 EXOC5O00471 708 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 HSF2BPO75031 334 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 MAPK8IP2Q13387 824 aaPredicted RBP9.72□□□□□ -0.85
TDP1-204ENST00000545686 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
TDP1-204ENST00000545686 SPATS2Q86XZ4 545 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms