RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 CDK7P50613 346 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 HDLBPQ00341 1268 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 PRR23BQ6ZRT6 265 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 RGL4Q8IZJ4 473 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 NPLOC4Q8TAT6 608 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 PABPC5Q96DU9 382 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 RIPOR3Q96MK2 946 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 HNRNPABQ99729 332 aaKnown RBP8.48□□□□□ -1.05
LDHA-223ENST00000545215 RBPJLQ9UBG7 517 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 PHIPQ8WWQ0 1821 aa8.48□□□□□ -1.05
LDHA-223ENST00000545215 SLC15A5A6NIM6 579 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 STXBP3O00186 592 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 PDGFBP01127 241 aaPredicted RBP8.47□□□□□ -1.05
LDHA-223ENST00000545215 PROS1P07225 676 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 GRM5P41594 1212 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
LDHA-223ENST00000545215 ZNF804AQ7Z570 1209 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 RNF180Q86T96 592 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 TMEM105Q8N8V8 129 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 PLBD2Q8NHP8 589 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 NUP133Q8WUM0 1156 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 SUGCTQ9HAC7 445 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 TMPRSS4Q9NRS4 437 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
LDHA-223ENST00000545215 USP9XQ93008 2570 aaPredicted RBP8.46□□□□□ -1.05
LDHA-223ENST00000545215 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 TAF4O00268 1085 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 FAM13AO94988 1023 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 EIF2S2P20042 333 aaKnown RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 KCNJ4P48050 445 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 RPIAP49247 311 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 ERVK-24P63145 666 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 RPUSD2Q8IZ73 545 aaKnown RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 PHOSPHO2Q8TCD6 241 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 RUBCNQ92622 972 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 VWCEQ96DN2 955 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 TSEN34Q9BSV6 310 aaKnown RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
LDHA-223ENST00000545215 ETNK1Q9HBU6 452 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 XPNPEP3Q9NQH7 507 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 NBEAQ8NFP9 2946 aa8.46□□□□□ -1.06
LDHA-223ENST00000545215 KIF28PB7ZC32 967 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 MBTPS2O43462 519 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
LDHA-223ENST00000545215 LILRA1O75019 489 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
LDHA-223ENST00000545215 FSHRP23945 695 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 ACLYP53396 1101 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 HERVK_113P62684 666 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 OLFML2BQ68BL8 750 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 APOBEC3HQ6NTF7 200 aaKnown RBP8.45□□□□□ -1.06
LDHA-223ENST00000545215 ZFPM1Q8IX07 1006 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 SLC9A7Q96T83 725 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 RTKNQ9BST9 563 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 MRIQ9BWK5 157 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 ANGPTL2Q9UKU9 493 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 LOC285556D6RIA3 1793 aa8.45□□□□□ -1.06
LDHA-223ENST00000545215 LOC730098B7Z3J9 87 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 SNAP23O00161 211 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 PGK1P00558 417 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 TCF3P15923 654 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 HOXA7P31268 230 aaPredicted RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 LTBRP36941 435 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 HMGCS2P54868 508 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 IRX3P78415 501 aaPredicted RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 KCNC4Q03721 635 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 CBX2Q14781 532 aaPredicted RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 ARID5BQ14865 1188 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 CCDC84Q86UT8 332 aaPredicted RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 HERC6Q8IVU3 1022 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 EHBP1Q8NDI1 1231 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 TEKT1Q969V4 418 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 HAUS7Q99871 368 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.44□□□□□ -1.06
LDHA-223ENST00000545215 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
LDHA-223ENST00000545215 COL4A3Q01955 1670 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 PCCAP05165 728 aaPredicted RBP8.43□□□□□ -1.06
LDHA-223ENST00000545215 NEFMP07197 916 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 RARBP10826 455 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 MPSTP25325 297 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 RING1Q06587 406 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 SPP2Q13103 211 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
LDHA-223ENST00000545215 PRAMEF19Q5SWL8 479 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms