RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 BTNL9Q6UXG8 535 aa18.73■□□□□ 0.59
CHFR-224ENST00000545046 TMEM39BQ9GZU3 492 aa18.73■□□□□ 0.59
CHFR-224ENST00000545046 MARCH6O60337 910 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 VSTM4Q8IW00 320 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 ZBED3Q96IU2 234 aaPredicted RBP18.72■□□□□ 0.59
CHFR-224ENST00000545046 MYOZ2Q9NPC6 264 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
CHFR-224ENST00000545046 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 SFPQP23246 707 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHFR-224ENST00000545046 AMPD3Q01432 767 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 KCNB1Q14721 858 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 CCDC47Q96A33 483 aaKnown RBP18.72■□□□□ 0.59
CHFR-224ENST00000545046 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
CHFR-224ENST00000545046 WNT10BO00744 389 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 CCZ1BP86790 482 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 CCZ1P86791 482 aaPredicted RBP18.71■□□□□ 0.59
CHFR-224ENST00000545046 AP3B2Q13367 1082 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 RWDD2AQ9UIY3 292 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 ECE1P42892 770 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 USP11P51784 963 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 TERF1P54274 439 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 SNAP25P60880 206 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 TRAF1Q13077 416 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 NBPF9Q3BBW0 867 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 SPICE1Q8N0Z3 855 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 CDK5RAP3Q96JB5 506 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 MMTAG2Q9BU76 263 aaKnown RBP18.71■□□□□ 0.59
CHFR-224ENST00000545046 ANO3Q9BYT9 981 aa18.71■□□□□ 0.59
CHFR-224ENST00000545046 STAT2P52630 851 aa18.7■□□□□ 0.58
CHFR-224ENST00000545046 PAK1Q13153 545 aa18.7■□□□□ 0.58
CHFR-224ENST00000545046 USH1GQ495M9 461 aa18.7■□□□□ 0.58
CHFR-224ENST00000545046 KMT5BQ4FZB7 885 aa18.7■□□□□ 0.58
CHFR-224ENST00000545046 MIGA2Q7L4E1 593 aa18.7■□□□□ 0.58
CHFR-224ENST00000545046 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 ARMCX5Q6P1M9 558 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 CTAGE1Q96RT6 745 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 SH2D4AQ9H788 454 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 STK17AQ9UEE5 414 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 PRR12Q9ULL5 1215 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 MEIS2O14770 477 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 RHOBTB3O94955 611 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 RPS12P25398 132 aaKnown RBP18.69■□□□□ 0.58
CHFR-224ENST00000545046 CAP2P40123 477 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 STIM1Q13586 685 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 CDKAL1Q5VV42 579 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 SV2BQ7L1I2 683 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 NELFBQ8WX92 580 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 C7orf25Q9BPX7 421 aa18.69■□□□□ 0.58
CHFR-224ENST00000545046 NFKBIEO00221 500 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 KLRC4O43908 158 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 FOSP01100 380 aaPredicted RBP18.68■□□□□ 0.58
CHFR-224ENST00000545046 PRCPP42785 496 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 LRRC15Q8TF66 581 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
CHFR-224ENST00000545046 BCS1LQ9Y276 419 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 GDAQ9Y2T3 454 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 GRB10Q13322 594 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 INTS13Q9NVM9 706 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 PCDHA12Q9UN75 941 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 CD2APQ9Y5K6 639 aa18.68■□□□□ 0.58
CHFR-224ENST00000545046 A0A1B0GTH6 734 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 POTEMA6NI47 508 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 MAP3K10Q02779 954 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 NR1I3Q14994 352 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 MOXD1Q6UVY6 613 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 CDAN1Q8IWY9 1227 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 SNX29Q8TEQ0 813 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 HAS1Q92839 578 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 TRIM9Q9C026 710 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 VCPKMTQ9H867 229 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
CHFR-224ENST00000545046 GOLGB1Q14789 3259 aaKnown RBP18.67■□□□□ 0.58
CHFR-224ENST00000545046 CYP3A7-CYP3A51PA0A087WV96 503 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 SPDYE3A6NKU9 549 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 CYP3A7P24462 503 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ZNF280AP59817 542 aaPredicted RBP18.66■□□□□ 0.58
CHFR-224ENST00000545046 ASIC1P78348 528 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 TNFAIP1Q13829 316 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ADSSL1Q8N142 457 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 GIMAP8Q8ND71 665 aaPredicted RBP18.66■□□□□ 0.58
CHFR-224ENST00000545046 EXOC1Q9NV70 894 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ATAD5Q96QE3 1844 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 SHTN1A0MZ66 631 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ASNSP08243 561 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 SPAG1Q07617 926 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms