RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
CDCA3-209ENST00000544610 SLC4A4Q9Y6R1 1079 aa7.7□□□□□ -1.18
CDCA3-209ENST00000544610 MYH8P13535 1937 aa7.7□□□□□ -1.18
CDCA3-209ENST00000544610 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
CDCA3-209ENST00000544610 PGK1P00558 417 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 APPP05067 770 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TAL1P17542 331 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 STAT3P40763 770 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TDO2P48775 406 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 EPHB4P54760 987 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 HIC1Q14526 733 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 AKNAD1Q5T1N1 836 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 CTR9Q6PD62 1173 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 BLOC1S2Q6QNY1 142 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 CCDC129Q6ZRS4 1044 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 ANKRD33Q7Z3H0 272 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TMTC2Q8N394 836 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 MSL3Q8N5Y2 521 aaKnown RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 PDCD7Q8N8D1 485 aaKnown RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 MAFAQ8NHW3 353 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 NCOA7Q8NI08 942 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 MYLIPQ8WY64 445 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 LENG1Q96BZ8 264 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 INTS4Q96HW7 963 aaKnown RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 RNPC3Q96LT9 517 aaKnown RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 ZSCAN31Q96LW9 406 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TTC14Q96N46 770 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 TEX13BQ9BXU2 312 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 EPB41L4AQ9HCS5 686 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 SH2B1Q9NRF2 756 aaPredicted RBP7.69□□□□□ -1.18
CDCA3-209ENST00000544610 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 SYNRGQ9UMZ2 1314 aa7.69□□□□□ -1.18
CDCA3-209ENST00000544610 COL11A1P12107 1806 aaPredicted RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 DNAJC25-GNG10A0A024R161 153 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 MOXD2PA6NHM9 499 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 A6NJR5 290 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 ATP2A1O14983 1001 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 PQBP1O60828 265 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 FOSL2P15408 326 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 RAG1P15918 1043 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 RPS6KB1P23443 525 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 MCM5P33992 734 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 LIFRP42702 1097 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 NEK4P51957 841 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 ACLYP53396 1101 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 EXOSC10Q01780 885 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 FPGSQ05932 587 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 PDE4BQ07343 736 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 SART3Q15020 963 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 CCSAPQ6IQ19 270 aaPredicted RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 MAMDC4Q6UXC1 1216 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 MFSD6Q6ZSS7 791 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 RALYLQ86SE5 291 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 HSCBQ8IWL3 235 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 KLHDC9Q8NEP7 349 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 TOX2Q96NM4 488 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 SLF1Q9BQI6 1058 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 HCSTQ9UBK5 93 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 CNPY2Q9Y2B0 182 aa7.68□□□□□ -1.18
CDCA3-209ENST00000544610 BAZ2AQ9UIF9 1905 aaKnown RBP7.68□□□□□ -1.18
CDCA3-209ENST00000544610 PLXNA1Q9UIW2 1896 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 E7EWF7 191 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 F5H6K3 240 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 TRAK2O60296 914 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 SNAI1O95863 264 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 NDUFB10O96000 172 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 RASA1P20936 1047 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 CST5P28325 142 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 KLRC3Q07444 240 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 PPARAQ07869 468 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 SNRNP48Q6IEG0 339 aaKnown RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 PRPF38AQ8NAV1 312 aaKnown RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 NUP133Q8WUM0 1156 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 ESR2Q92731 530 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 NUP88Q99567 741 aaPredicted RBP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 STARD7Q9NQZ5 370 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 TCP11L1Q9NUJ3 509 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 TMEM39AQ9NV64 488 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 NYAP2Q9P242 653 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 TBX21Q9UL17 535 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 FAM184BQ9ULE4 1060 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 SYNPO2Q9UMS6 1093 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDCA3-209ENST00000544610 XIRP2A4UGR9 3374 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 PLIN4Q96Q06 1357 aa7.67□□□□□ -1.18
CDCA3-209ENST00000544610 IGKV6D-41A0A0C4DH26 115 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms