RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 PPP2R2CQ9Y2T4 447 aa23.53■■□□□ 1.36
CCDC189-207ENST00000544487 ASIC1P78348 528 aa23.53■■□□□ 1.36
CCDC189-207ENST00000544487 SPAG1Q07617 926 aa23.53■■□□□ 1.36
CCDC189-207ENST00000544487 STIM1Q13586 685 aa23.53■■□□□ 1.36
CCDC189-207ENST00000544487 H7C1D1 291 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 COPB1P53618 953 aaKnown RBP23.52■■□□□ 1.36
CCDC189-207ENST00000544487 GRB10Q13322 594 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 CC2D2BQ6DHV5 1058 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 PPP4R3AQ6IN85 833 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 TOGARAM2Q6ZUX3 1019 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 IRF2BP1Q8IU81 584 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 ANKRD20A12PQ8NF67 263 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 C7orf25Q9BPX7 421 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 DDX25Q9UHL0 483 aaKnown RBP23.52■■□□□ 1.36
CCDC189-207ENST00000544487 PCDHA1Q9Y5I3 950 aa23.52■■□□□ 1.36
CCDC189-207ENST00000544487 USP17L15C9J2P7 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L13C9JLJ4 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L11C9JVI0 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L18D6R9N7 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L22D6RA61 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L17D6RBQ6 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L19D6RCP7 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L20D6RJB6 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 PSMA7O14818 248 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 ZSCAN12O43309 604 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 JAG1P78504 1218 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 PDE4DQ08499 809 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L24Q0WX57 530 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 CDC37Q16543 378 aaPredicted RBP23.51■■□□□ 1.35
CCDC189-207ENST00000544487 USP17L6PQ6QN14 398 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 PANX2Q96RD6 677 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 NUP88Q99567 741 aaPredicted RBP23.51■■□□□ 1.35
CCDC189-207ENST00000544487 EXOC1Q9NV70 894 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 ATRNL1Q5VV63 1379 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 F5H6K3 240 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 AMPD3Q01432 767 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 KLRC3Q07444 240 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 SEMA3FQ13275 785 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 GJA10Q969M2 543 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 CSRNP1Q96S65 589 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 MYH7BA7E2Y1 1941 aa23.51■■□□□ 1.35
CCDC189-207ENST00000544487 ENTPD3O75355 529 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 CASP14P31944 242 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 CDK5RAP3Q96JB5 506 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 PNMA5Q96PV4 448 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 RAB34Q9BZG1 259 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 BLOC1S4Q9NUP1 217 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 GH2P01242 217 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 GYPCP04921 128 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 SNAP25P60880 206 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 ETF1P62495 437 aaKnown RBP23.5■■□□□ 1.35
CCDC189-207ENST00000544487 STK4Q13043 487 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 PDIA5Q14554 519 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 NAA30Q147X3 362 aaPredicted RBP23.5■■□□□ 1.35
CCDC189-207ENST00000544487 CCDC47Q96A33 483 aaKnown RBP23.5■■□□□ 1.35
CCDC189-207ENST00000544487 TRIM47Q96LD4 638 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 NUDT12Q9BQG2 462 aa23.5■■□□□ 1.35
CCDC189-207ENST00000544487 ATF5Q9Y2D1 282 aaPredicted RBP23.5■■□□□ 1.35
CCDC189-207ENST00000544487 ITIH6Q6UXX5 1313 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 MFAP3LO75121 409 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 FCER1AP12319 257 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 NCBP1Q09161 790 aaKnown RBP23.49■■□□□ 1.35
CCDC189-207ENST00000544487 RRP1BQ14684 758 aaKnown RBP23.49■■□□□ 1.35
CCDC189-207ENST00000544487 MTF1Q14872 753 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 TRIM65Q6PJ69 517 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 SV2BQ7L1I2 683 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 HAS1Q92839 578 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 MAP7D2Q96T17 732 aa23.49■■□□□ 1.35
CCDC189-207ENST00000544487 SOWAHDA6NJG2 315 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 FXR1P51114 621 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 MCM6Q14566 821 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 TTI2Q6NXR4 508 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 SNX29Q8TEQ0 813 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 DESI2Q9BSY9 194 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 SRRTQ9BXP5 876 aaKnown RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 RGS17Q9UGC6 210 aaPredicted RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 DNAI1Q9UI46 699 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 RAD17O75943 681 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 NDUFB10O96000 172 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 TUBB4AP04350 444 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 RBM26Q5T8P6 1007 aaKnown RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 MTERF4Q7Z6M4 381 aaKnown RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 GMCL1P1Q8NEA9 526 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 HPS3Q969F9 1004 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 DHTKD1Q96HY7 919 aaPredicted RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 STK17AQ9UEE5 414 aa23.48■■□□□ 1.35
CCDC189-207ENST00000544487 ZNF215Q9UL58 517 aaPredicted RBP23.48■■□□□ 1.35
CCDC189-207ENST00000544487 ARFGEF1Q9Y6D6 1849 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 TCP10L2B9ZVM9 353 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 IKQ13123 557 aaPredicted RBP23.47■■□□□ 1.35
CCDC189-207ENST00000544487 KRT79Q5XKE5 535 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 POTEAQ6S8J7 498 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 TTLL6Q8N841 843 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 ANKRD7Q92527 254 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 LARP4BQ92615 738 aaKnown RBP23.47■■□□□ 1.35
CCDC189-207ENST00000544487 EEF2KMTQ96G04 330 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 UIMC1Q96RL1 719 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 THAP9Q9H5L6 903 aa23.47■■□□□ 1.35
CCDC189-207ENST00000544487 CLRN2A0PK11 232 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms