RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 RIOK1Q9BRS2 568 aaKnown RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 ZNF215Q9UL58 517 aaPredicted RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 PYCARDQ9ULZ3 195 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 TNNC2P02585 160 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 MMP1P03956 469 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 MCAMP43121 646 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 EXOC3L4Q17RC7 722 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 UHMK1Q8TAS1 419 aaKnown RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 GOLGA5Q8TBA6 731 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 ABL1P00519 1130 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 KSR1Q8IVT5 923 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 ADPGKQ9BRR6 497 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 HYOU1Q9Y4L1 999 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 NR2F2P24468 414 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 MAN1A1P33908 653 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 PDE6CP51160 858 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 ETF1P62495 437 aaKnown RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 UBE2SQ16763 222 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 ANKRD42Q8N9B4 389 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 TBC1D31Q96DN5 1066 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 GSDMAQ96QA5 445 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 KANSL2Q9H9L4 492 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 GJB4Q9NTQ9 266 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 HNRNPDLO14979 420 aaKnown RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 IGKV5-2P06315 115 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 YWHAEP62258 255 aaKnown RBP14.05□□□□□ -0.16
CHD4-211ENST00000544484 CUL4AQ13619 759 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 APOL6Q9BWW8 343 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 H2AFZP0C0S5 128 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 SNAP25P60880 206 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 DENND2CQ68D51 928 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 H2AFVQ71UI9 128 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 METTL14Q9HCE5 456 aaKnown RBP14.04□□□□□ -0.16
CHD4-211ENST00000544484 KIF1BO60333 1816 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 TTC31Q49AM3 519 aaPredicted RBP14.04□□□□□ -0.16
CHD4-211ENST00000544484 BRINP3Q76B58 766 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 RSAD2Q8WXG1 361 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 PCDHB6Q9Y5E3 794 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 H7C1W4 665 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 CLIC2O15247 247 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 BMP3P12645 472 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 RASSF7Q02833 373 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 TAOK1Q7L7X3 1001 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
CHD4-211ENST00000544484 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 RAB17Q9H0T7 212 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 PFDN4Q9NQP4 134 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 CDK12Q9NYV4 1490 aaPredicted RBP14.04□□□□□ -0.16
CHD4-211ENST00000544484 ZNF131P52739 623 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 CACNB3P54284 484 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 NECTIN1Q15223 517 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 VPS52Q8N1B4 723 aa14.04□□□□□ -0.16
CHD4-211ENST00000544484 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
CHD4-211ENST00000544484 ENC1O14682 589 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 IFNAR1P17181 557 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 TRAPPC10P48553 1259 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 KRT81Q14533 505 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 CAPN9O14815 690 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 GTF2A1P52655 376 aaPredicted RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 WHAMMP3Q1A5X7 153 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 VSIG1Q86XK7 387 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 HAUS4Q9H6D7 363 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 NRBP2Q9NSY0 501 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 RAB20Q9NX57 234 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 TPD52P55327 224 aaPredicted RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 EHHADHQ08426 723 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 B4GALNT4Q76KP1 1039 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 EEPD1Q7L9B9 569 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 DDX23Q9BUQ8 820 aaKnown RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 SYNJ2BP-COX16A0A087WUM0 186 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 RXRBP28702 533 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 KAZNQ674X7 775 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 NSMCE1Q8WV22 266 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 STMN2Q93045 179 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 PCIF1Q9H4Z3 704 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 COX16Q9P0S2 106 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 N4BP1O75113 896 aaKnown RBP14.03□□□□□ -0.16
CHD4-211ENST00000544484 ADCY8P40145 1251 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 KCTD2Q14681 263 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 CABS1Q96KC9 395 aa14.03□□□□□ -0.16
CHD4-211ENST00000544484 PPFIA1Q13136 1202 aa14.02□□□□□ -0.16
CHD4-211ENST00000544484 GRAPQ13588 217 aa14.02□□□□□ -0.16
CHD4-211ENST00000544484 SPATA24Q86W54 205 aa14.02□□□□□ -0.16
CHD4-211ENST00000544484 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.16
CHD4-211ENST00000544484 STAM2O75886 525 aa14.02□□□□□ -0.17
CHD4-211ENST00000544484 PLEKHA8P1O95397 391 aa14.02□□□□□ -0.17
CHD4-211ENST00000544484 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
CHD4-211ENST00000544484 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.17
CHD4-211ENST00000544484 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms