RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 TMEM67Q5HYA8 995 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 KRT40Q6A162 431 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 RCSD1Q6JBY9 416 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 FAM122AQ96E09 287 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 C1QTNF1Q9BXJ1 281 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
CD4-212ENST00000544344 TNKSO95271 1327 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 TET1Q8NFU7 2136 aa18.38■□□□□ 0.53
CD4-212ENST00000544344 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 FOXP2O15409 715 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 NMT2O60551 498 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 PDE4BQ07343 736 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 PPARAQ07869 468 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
CD4-212ENST00000544344 AAK1Q2M2I8 961 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 NSMFQ6X4W1 530 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 DEFB128Q7Z7B8 93 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 CERS4Q9HA82 394 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
CD4-212ENST00000544344 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
CD4-212ENST00000544344 RBM47A0AV96 593 aaKnown RBP18.36■□□□□ 0.53
CD4-212ENST00000544344 SUPT20HL2P0C7V6 817 aa18.36■□□□□ 0.53
CD4-212ENST00000544344 NOVP48745 357 aa18.36■□□□□ 0.53
CD4-212ENST00000544344 EPHX3Q9H6B9 360 aa18.36■□□□□ 0.53
CD4-212ENST00000544344 INCENPQ9NQS7 918 aa18.36■□□□□ 0.53
CD4-212ENST00000544344 CCPG1Q9ULG6 757 aa18.36■□□□□ 0.53
CD4-212ENST00000544344 TLL1O43897 1013 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 ICAM1P05362 532 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 ALDH5A1P51649 535 aaPredicted RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 TAP1Q03518 808 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 BAATQ14032 418 aaPredicted RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 RANBP17Q9H2T7 1088 aaKnown RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
CD4-212ENST00000544344 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
CD4-212ENST00000544344 NFIBO00712 420 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 MYL3P08590 195 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 PHOSPHO2Q8TCD6 241 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 SLC9A7Q96T83 725 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 NAPBQ9H115 298 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 DCTPP1Q9H773 170 aa18.34■□□□□ 0.53
CD4-212ENST00000544344 BRWD1Q9NSI6 2320 aa18.33■□□□□ 0.53
CD4-212ENST00000544344 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
CD4-212ENST00000544344 LPXNO60711 386 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
CD4-212ENST00000544344 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 RFC2P35250 354 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 CPT1AP50416 773 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 MTG1Q9BT17 334 aaPredicted RBP18.33■□□□□ 0.52
CD4-212ENST00000544344 LRFN3Q9BTN0 628 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 COG5Q9UP83 839 aa18.33■□□□□ 0.52
CD4-212ENST00000544344 COL4A4P53420 1690 aaPredicted RBP18.33■□□□□ 0.52
CD4-212ENST00000544344 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 ACTN1P12814 892 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 SLC16A2P36021 539 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 CTDSPL2Q05D32 466 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
CD4-212ENST00000544344 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 ARNTL2Q8WYA1 636 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.52
CD4-212ENST00000544344 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
CD4-212ENST00000544344 ADD3Q9UEY8 706 aaKnown RBP18.32■□□□□ 0.52
CD4-212ENST00000544344 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
CD4-212ENST00000544344 A6NJR5 290 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 TSPY2A6NKD2 308 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 GRB10Q13322 594 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 GPNMBQ14956 572 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 NFRKBQ6P4R8 1299 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
CD4-212ENST00000544344 ARIH1Q9Y4X5 557 aaPredicted RBP18.31■□□□□ 0.52
CD4-212ENST00000544344 EDNRBP24530 442 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 FAM47CQ5HY64 1035 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 MIER1Q8N108 512 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 COPS5Q92905 334 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 CTAGE1Q96RT6 745 aa18.3■□□□□ 0.52
CD4-212ENST00000544344 FGRP09769 529 aa18.29■□□□□ 0.52
CD4-212ENST00000544344 PTPN11Q06124 597 aaPredicted RBP18.29■□□□□ 0.52
CD4-212ENST00000544344 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
CD4-212ENST00000544344 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
CD4-212ENST00000544344 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms