RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 APOL6Q9BWW8 343 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 CFLARO15519 480 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 ACTN1P12814 892 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 CYP4A11Q02928 519 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 HESX1Q9UBX0 185 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 PCDHB4Q9Y5E5 795 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
CHD4-210ENST00000544040 USP17L12C9JPN9 530 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 USP17L21D6R901 530 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 N4BP1O75113 896 aaKnown RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 MOCS3O95396 460 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 DMTNQ08495 405 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 PARP10Q53GL7 1025 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 ZBTB8OSQ8IWT0 167 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 LARGE2Q8N3Y3 721 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 IPO11Q9UI26 975 aaKnown RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 GTPBP6O43824 516 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 GCP02774 474 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 LMNB1P20700 586 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 TMEM259Q4ZIN3 620 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 KLHL29Q96CT2 875 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 CFAP36Q96G28 342 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 FNDC3AQ9Y2H6 1198 aaKnown RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 MAP3K7O43318 606 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 ZNF449Q6P9G9 518 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 RAB44Q7Z6P3 723 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 SCHIP1Q9P0W5 487 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 NCF2P19878 526 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 CMA1P23946 247 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 RNF217Q8TC41 542 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 IWS1Q96ST2 819 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 CDC23Q9UJX2 597 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 EEF1DP29692 281 aaKnown RBP16.81■□□□□ 0.28
CHD4-210ENST00000544040 NPATQ14207 1427 aa16.81■□□□□ 0.28
CHD4-210ENST00000544040 LRRIQ4A6NIV6 560 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 PFDN6O15212 129 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 ESRRGP62508 458 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 DMP1Q13316 513 aaPredicted RBP16.8■□□□□ 0.28
CHD4-210ENST00000544040 EFCAB13Q8IY85 973 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 SCOCQ9UIL1 159 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 TNRQ92752 1358 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 FTCDO95954 541 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 CTNND1O60716 968 aaKnown RBP16.8■□□□□ 0.28
CHD4-210ENST00000544040 MSH2P43246 934 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 NEK8Q86SG6 692 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 ZNF653Q96CK0 615 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 CYTH2Q99418 400 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 MROH5Q6ZUA9 1318 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 A0A1W2PP64 1363 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 EVI5O60447 810 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 APBA1Q02410 837 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
CHD4-210ENST00000544040 IQCB1Q15051 598 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 CPP00450 1065 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 SLC7A5Q01650 507 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
CHD4-210ENST00000544040 SLC4A7Q9Y6M7 1214 aa16.8■□□□□ 0.28
CHD4-210ENST00000544040 PTGDRQ13258 359 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 PARD3BQ8TEW8 1205 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
CHD4-210ENST00000544040 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 OLA1Q9NTK5 396 aaKnown RBP16.79■□□□□ 0.28
CHD4-210ENST00000544040 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
CHD4-210ENST00000544040 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
CHD4-210ENST00000544040 GCKRQ14397 625 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 SGO2Q562F6 1265 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 NNTQ13423 1086 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 SLFN12Q8IYM2 578 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 TUBGCP2Q9BSJ2 902 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 POLA2Q14181 598 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 LRRC41Q15345 812 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 ACRBPQ8NEB7 543 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 ZMAT2Q96NC0 199 aaKnown RBP16.79■□□□□ 0.28
CHD4-210ENST00000544040 INPP5FQ9Y2H2 1132 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 EPHB4P54760 987 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 KRT80Q6KB66 452 aa16.79■□□□□ 0.28
CHD4-210ENST00000544040 CCNYQ8ND76 341 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms