RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PTPRAP18433 802 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 USP11P51784 963 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 MTMR2Q13614 643 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 PDXDC2PQ6P474 469 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 DHX40Q8IX18 779 aaKnown RBP22.44■■□□□ 1.18
COPS7A-218ENST00000543939 CRYGNQ8WXF5 182 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 EMILIN3Q9NT22 766 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 FZD1Q9UP38 647 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 PARP14Q460N5 1801 aa22.44■■□□□ 1.18
COPS7A-218ENST00000543939 ADCY5O95622 1261 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 USP14P54578 494 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 SMARCE1Q969G3 411 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 AS3MTQ9HBK9 375 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 DDX25Q9UHL0 483 aaKnown RBP22.43■■□□□ 1.18
COPS7A-218ENST00000543939 MAN1B1Q9UKM7 699 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 UBA7P41226 1012 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 FXR2P51116 673 aaKnown RBP eCLIP22.43■■□□□ 1.18
COPS7A-218ENST00000543939 SPP2Q13103 211 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 DGKZQ13574 1117 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 KARSQ15046 597 aaKnown RBP22.43■■□□□ 1.18
COPS7A-218ENST00000543939 NOL9Q5SY16 702 aaKnown RBP22.43■■□□□ 1.18
COPS7A-218ENST00000543939 ISM2Q6H9L7 571 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 IGSF22Q8N9C0 903 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 PRPF38AQ8NAV1 312 aaKnown RBP22.43■■□□□ 1.18
COPS7A-218ENST00000543939 SLF1Q9BQI6 1058 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 DISC1Q9NRI5 854 aa22.43■■□□□ 1.18
COPS7A-218ENST00000543939 CYP3A7-CYP3A51PA0A087WV96 503 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 CYP3A7P24462 503 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 TECP42680 631 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 AFMP43652 599 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 MOXD1Q6UVY6 613 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 ZNF280CQ8ND82 737 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 L3MBTL3Q96JM7 780 aaPredicted RBP22.42■■□□□ 1.18
COPS7A-218ENST00000543939 MBOAT7Q96N66 472 aa22.42■■□□□ 1.18
COPS7A-218ENST00000543939 MRPL11Q9Y3B7 192 aaKnown RBP22.42■■□□□ 1.18
COPS7A-218ENST00000543939 ABCB11O95342 1321 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 GOLGA6L19H0YKK7 550 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 SMC2O95347 1197 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 VCAM1P19320 739 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 SREBF1P36956 1147 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 TXKP42681 527 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 BACE1P56817 501 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 DPYDQ12882 1025 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 DPY19L2Q6NUT2 758 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 LDHDQ86WU2 507 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 TRIML1Q8N9V2 468 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 DCPSQ96C86 337 aaKnown RBP22.41■■□□□ 1.18
COPS7A-218ENST00000543939 PAPPA2Q9BXP8 1791 aa22.41■■□□□ 1.18
COPS7A-218ENST00000543939 SPDYE3A6NKU9 549 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 BECN2A8MW95 431 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 BMP6P22004 513 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 HOXA13P31271 388 aaPredicted RBP22.4■■□□□ 1.18
COPS7A-218ENST00000543939 STAT6P42226 847 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 ARHGAP4P98171 946 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 MORC3Q14149 939 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 SAMD1Q6SPF0 538 aaPredicted RBP22.4■■□□□ 1.18
COPS7A-218ENST00000543939 CABP7Q86V35 215 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 AOPEPQ8N6M6 819 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■■■□□ 14.6
COPS7A-218ENST00000543939 HAS1Q92839 578 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 CCDC39Q9UFE4 941 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 ZNF536O15090 1300 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 USP2O75604 605 aaPredicted RBP22.4■■□□□ 1.18
COPS7A-218ENST00000543939 ICAM1P05362 532 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 PLCB2Q00722 1185 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 NAALADL2Q58DX5 795 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 RRAGBQ5VZM2 374 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 MTRQ99707 1265 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 ZHX2Q9Y6X8 837 aa22.4■■□□□ 1.18
COPS7A-218ENST00000543939 PDIA5Q14554 519 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 TMEM266Q2M3C6 531 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 SULF1Q8IWU6 871 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 TBC1D5Q92609 795 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 TRIM44Q96DX7 344 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-218ENST00000543939 C12orf42Q96LP6 360 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 MMTAG2Q9BU76 263 aaKnown RBP22.39■■□□□ 1.17
COPS7A-218ENST00000543939 TANGO6Q9C0B7 1094 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 RPAP3Q9H6T3 665 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-218ENST00000543939 UTRNP46939 3433 aa22.39■■□□□ 1.17
COPS7A-218ENST00000543939 RLFQ13129 1914 aa22.38■■□□□ 1.17
COPS7A-218ENST00000543939 PPP1R9AQ9ULJ8 1098 aa22.38■■□□□ 1.17
COPS7A-218ENST00000543939 OTOFQ9HC10 1997 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 C19orf81C9J6K1 198 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 ADM5C9JUS6 153 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 GCOM1H8Y6P7 765 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-218ENST00000543939 GTPBP6O43824 516 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-218ENST00000543939 FLOT1O75955 427 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CFBP00751 764 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 POLR2MP0CAP2 368 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CASP1P29466 404 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 DLK2Q6UY11 383 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 USP50Q70EL3 339 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-218ENST00000543939 STAMQ92783 540 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 AGBL1Q96MI9 1066 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 GSDMAQ96QA5 445 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 RAB34Q9BZG1 259 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-218ENST00000543939 SLC38A10Q9HBR0 1119 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 KCNMB3Q9NPA1 279 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms