RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 EPSTI1Q96J88 318 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 PAGE5Q96GU1 130 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 SETD1BQ9UPS6 1966 aaKnown RBP21.24■□□□□ 0.99
SUDS3-204ENST00000543473 BIRC3Q13489 604 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 MYCT1Q8N699 235 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 MIPOL1Q8TD10 442 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 N4BP2L2Q92802 583 aaPredicted RBP21.24■□□□□ 0.99
SUDS3-204ENST00000543473 AGTPBP1Q9UPW5 1226 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 LUC7L3O95232 432 aaKnown RBP21.24■□□□□ 0.99
SUDS3-204ENST00000543473 TBC1D8O95759 1140 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 GBP5Q96PP8 586 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 WDR24Q96S15 920 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 ADGRG1Q9Y653 693 aa21.24■□□□□ 0.99
SUDS3-204ENST00000543473 WDR44Q5JSH3 913 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 HIBCHQ6NVY1 386 aaPredicted RBP21.23■□□□□ 0.99
SUDS3-204ENST00000543473 NEK8Q86SG6 692 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.23■□□□□ 0.99
SUDS3-204ENST00000543473 PDE8BO95263 885 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 FAM26FQ5R3K3 315 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 LIN9Q5TKA1 542 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 PNMA1Q8ND90 353 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 PUS7LQ9H0K6 701 aaKnown RBP21.23■□□□□ 0.99
SUDS3-204ENST00000543473 MAGEF1Q9HAY2 307 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 SPATS2LQ9NUQ6 558 aaKnown RBP21.23■□□□□ 0.99
SUDS3-204ENST00000543473 CIAO1O76071 339 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 GGCXP38435 758 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 PHLDB2Q86SQ0 1253 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 MAIP1Q8WWC4 291 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 DDAH1O94760 285 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 TROVE2P10155 538 aaKnown RBP eCLIP21.23■□□□□ 0.99
SUDS3-204ENST00000543473 SRLQ86TD4 932 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 GPBP1Q86WP2 473 aa21.23■□□□□ 0.99
SUDS3-204ENST00000543473 CDC25AP30304 524 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 HSPA1LP34931 641 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 EIF4A3P38919 411 aaKnown RBP21.22■□□□□ 0.99
SUDS3-204ENST00000543473 PHKA1P46020 1223 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 CHRNDQ07001 517 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 FAM114A2Q9NRY5 505 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 SEMA3EO15041 775 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 TCP11X2Q5H9J9 407 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 WHAMMQ8TF30 809 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 CUEDC2Q9H467 287 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 VPS37BQ9H9H4 285 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 PNPLA6Q8IY17 1366 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 KCNJ6P48051 423 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 ADAM9Q13443 819 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 CHUKO15111 745 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 SRGAP2O75044 1071 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 FTCDO95954 541 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 MRPS25P82663 173 aaKnown RBP21.22■□□□□ 0.99
SUDS3-204ENST00000543473 MAP7D1Q3KQU3 841 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 FNBP1Q96RU3 617 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.22■□□□□ 0.99
SUDS3-204ENST00000543473 ARPP21Q9UBL0 812 aaPredicted RBP21.22■□□□□ 0.99
SUDS3-204ENST00000543473 ANAPC4Q9UJX5 808 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 ATP8A1Q9Y2Q0 1164 aa21.22■□□□□ 0.99
SUDS3-204ENST00000543473 MED14O60244 1454 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 PTPREP23469 700 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 GUCY2CP25092 1073 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 FAM196AQ6ZSG2 479 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 KIDINS220Q9ULH0 1771 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 ARHGEF35A5YM69 484 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 MAN2A1Q16706 1144 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 GALNT17Q6IS24 598 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 PHLDB3Q6NSJ2 640 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 MAPKAPK5Q8IW41 473 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 ABHD10Q9NUJ1 306 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 ARHGEF40Q8TER5 1519 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 TRIM37O94972 964 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 VPS41P49754 854 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 USP31Q70CQ4 1352 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 CCDC13Q8IYE1 715 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 KLHL29Q96CT2 875 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 FAM212AQ96EL1 285 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 PANK4Q9NVE7 773 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 NFU1Q9UMS0 254 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 USTQ9Y2C2 406 aa21.21■□□□□ 0.99
SUDS3-204ENST00000543473 KDM3AQ9Y4C1 1321 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 HMGB1P1B2RPK0 211 aaPredicted RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 TXNDC9O14530 226 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 DHX9Q08211 1270 aaKnown RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 ZSWIM5Q9P217 1185 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 NOVA2Q9UNW9 492 aaKnown RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 LRRD1A4D1F6 860 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 PGRMC1O00264 195 aaKnown RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 ALDH1B1P30837 517 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 SDCCAG8Q86SQ7 713 aaPredicted RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 RDH13Q8NBN7 331 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 MSANTD4Q8NCY6 345 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 MAK16Q9BXY0 300 aaKnown RBP21.2■□□□□ 0.98
SUDS3-204ENST00000543473 PCDHA13Q9Y5I0 950 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 NLRP10Q86W26 655 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 MB21D1Q8N884 522 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 PCDHA12Q9UN75 941 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 ADD2P35612 726 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 LIFRP42702 1097 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 PI16Q6UXB8 463 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 RAB3IL1Q8TBN0 382 aa21.2■□□□□ 0.98
SUDS3-204ENST00000543473 THAP9Q9H5L6 903 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms