RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PARK7Q99497 189 aaKnown RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDB1-221ENST00000543162 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
DDB1-221ENST00000543162 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 RIPK3Q9Y572 518 aa12.19□□□□□ -0.46
DDB1-221ENST00000543162 SPDYE3A6NKU9 549 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 CNMDO75829 334 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
DDB1-221ENST00000543162 HSD17B4P51659 736 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 TTC38Q5R3I4 469 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 SAMD3Q8N6K7 520 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 SPATC1LQ9H0A9 340 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
DDB1-221ENST00000543162 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
DDB1-221ENST00000543162 RASSF10A6NK89 507 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDB1-221ENST00000543162 PEX10O60683 326 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 YEATS4O95619 227 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 SLC25A27O95847 323 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 COPB2P35606 906 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 GHRHRQ02643 423 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 NOGQ13253 232 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 NBR1Q14596 966 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 STK38Q15208 465 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 NFKBIBQ15653 356 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 RNF207Q6ZRF8 634 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 NEK8Q86SG6 692 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 MOV10L1Q9BXT6 1211 aaKnown RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 TXNRD2Q9NNW7 524 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 MAP3K20Q9NYL2 800 aaKnown RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 FBXO40Q9UH90 709 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 PCDHB6Q9Y5E3 794 aa12.17□□□□□ -0.46
DDB1-221ENST00000543162 RBBP6Q7Z6E9 1792 aaKnown RBP12.17□□□□□ -0.46
DDB1-221ENST00000543162 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
DDB1-221ENST00000543162 BMP15O95972 392 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 PTMSP20962 102 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 ERVK-9P63128 1117 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 ERVK-24P63145 666 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 CCNA1P78396 465 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
DDB1-221ENST00000543162 ZNF174Q15697 407 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 LETM2Q2VYF4 491 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 KCNG4Q8TDN1 519 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 MAF1Q9H063 256 aa12.16□□□□□ -0.46
DDB1-221ENST00000543162 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
DDB1-221ENST00000543162 ELP1O95163 1332 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 WNT7AO00755 349 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 SPTLC2O15270 562 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 ERCC3P19447 782 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 MCM7P33993 719 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 SREBF1P36956 1147 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 TM4SF4P48230 202 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
DDB1-221ENST00000543162 ARHGAP4P98171 946 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 BAATQ14032 418 aaPredicted RBP12.15□□□□□ -0.46
DDB1-221ENST00000543162 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 PTPAQ15257 358 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 Q3C1V9 767 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 SLC30A10Q6XR72 485 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 ANKRD13CQ8N6S4 541 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 SHCBP1Q8NEM2 672 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
DDB1-221ENST00000543162 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
DDB1-221ENST00000543162 MROH8Q9H579 483 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
DDB1-221ENST00000543162 PFASO15067 1338 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 MYH7BA7E2Y1 1941 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 GOLGA6L4A6NEF3 574 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
DDB1-221ENST00000543162 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
DDB1-221ENST00000543162 ME1P48163 572 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms