RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
DDX11-221ENST00000542661 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
DDX11-221ENST00000542661 DEFB118Q96PH6 123 aa16.4■□□□□ 0.22
DDX11-221ENST00000542661 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 SOWAHBA6NEL2 793 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 CALML3P27482 149 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 CNGA1P29973 690 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
DDX11-221ENST00000542661 CCND3P30281 292 aaPredicted RBP16.39■□□□□ 0.21
DDX11-221ENST00000542661 SLC30A10Q6XR72 485 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
DDX11-221ENST00000542661 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 DNERQ8NFT8 737 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 FGD4Q96M96 766 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
DDX11-221ENST00000542661 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
DDX11-221ENST00000542661 SEPT4O43236 478 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
DDX11-221ENST00000542661 CDC27P30260 824 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
DDX11-221ENST00000542661 GHRHRQ02643 423 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 FUT2Q10981 343 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 ARMCX2Q7L311 632 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 ABHD16BQ9H3Z7 469 aa16.38■□□□□ 0.21
DDX11-221ENST00000542661 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.38■□□□□ 0.21
DDX11-221ENST00000542661 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
DDX11-221ENST00000542661 SNAI1O95863 264 aaPredicted RBP16.37■□□□□ 0.21
DDX11-221ENST00000542661 CFBP00751 764 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 EN2P19622 333 aaPredicted RBP16.37■□□□□ 0.21
DDX11-221ENST00000542661 HSD17B4P51659 736 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 NEK4P51957 841 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 MORC4Q8TE76 937 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 CRISPLD2Q9H0B8 497 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 DDX20Q9UHI6 824 aaKnown RBP16.37■□□□□ 0.21
DDX11-221ENST00000542661 V9GY48 417 aaPredicted RBP16.37■□□□□ 0.21
DDX11-221ENST00000542661 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
DDX11-221ENST00000542661 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 OPLAHO14841 1288 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 POLR2MP0CAP2 368 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 ACVR2BQ13705 512 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 PRAMEF19Q5SWL8 479 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 CPLX2Q6PUV4 134 aaKnown RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 ANKLE1Q8NAG6 615 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 IL27Q8NEV9 243 aa16.36■□□□□ 0.21
DDX11-221ENST00000542661 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
DDX11-221ENST00000542661 MCM3APO60318 1980 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 CPLX1O14810 134 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
DDX11-221ENST00000542661 AKR1A1P14550 325 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 IFNAR1P17181 557 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 LHX8Q68G74 356 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 CUL5Q93034 780 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 PURBQ96QR8 312 aaKnown RBP16.35■□□□□ 0.21
DDX11-221ENST00000542661 IWS1Q96ST2 819 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 ZHX1Q9UKY1 873 aaPredicted RBP16.35■□□□□ 0.21
DDX11-221ENST00000542661 OGDHLQ9ULD0 1010 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 ASTN1O14525 1302 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 LCTP09848 1927 aa16.35■□□□□ 0.21
DDX11-221ENST00000542661 hCG_1642624A0A1W2PR95 340 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 RARBP10826 455 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 AK2P54819 239 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 CCT2P78371 535 aaKnown RBP16.34■□□□□ 0.21
DDX11-221ENST00000542661 PDE4DQ08499 809 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 PPP1R18Q6NYC8 613 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
DDX11-221ENST00000542661 PSTPIP2Q9H939 334 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
DDX11-221ENST00000542661 PIK3CDO00329 1044 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
DDX11-221ENST00000542661 CDKL5O76039 1030 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 EDNRBP24530 442 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 NTRK3Q16288 839 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 CCDC144BQ3MJ40 725 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 ARHGEF16Q5VV41 709 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 ARRDC4Q8NCT1 418 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 TAAR1Q96RJ0 339 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
DDX11-221ENST00000542661 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
DDX11-221ENST00000542661 KATNBL1Q9H079 304 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.2
DDX11-221ENST00000542661 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
DDX11-221ENST00000542661 PFKFB2O60825 505 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 FARP2O94887 1054 aaPredicted RBP16.32■□□□□ 0.2
DDX11-221ENST00000542661 SCG2P13521 617 aa16.32■□□□□ 0.2
DDX11-221ENST00000542661 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms