RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RAB21Q9UL25 225 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PCDHA4Q9UN74 947 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC88AQ3V6T2 1871 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 A0A1W2PQC6 194 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KCNJ18B7U540 433 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 H7C1D1 291 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MAP2K7O14733 419 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 N4BP3O15049 544 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KLRC4O43908 158 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 GPR37L1O60883 481 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 GTF2E1P29083 439 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 HIBADHP31937 336 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 MCM7P33993 719 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 PRCPP42785 496 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 KCNJ12Q14500 433 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 SLC35G1Q2M3R5 365 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 VARS2Q5ST30 1063 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TEX35Q5T0J7 233 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 C12orf60Q5U649 245 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 GALNT17Q6IS24 598 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CYP26C1Q6V0L0 522 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF662Q6ZS27 426 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 SULF1Q8IWU6 871 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CEP112Q8N8E3 955 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF507Q8TCN5 953 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CPLX3Q8WVH0 158 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 NELFBQ8WX92 580 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 STAMQ92783 540 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 CCSER1Q9C0I3 900 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ARFGAP3Q9NP61 516 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 LZTFL1Q9NQ48 299 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 DISC1Q9NRI5 854 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 IL17RBQ9NRM6 502 aa5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-212ENST00000542495 TSPY2A6NKD2 308 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 LGALS16A8MUM7 142 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 LAD1O00515 517 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 KCNQ2O43526 872 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 EEF1GP26641 437 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PRDX5P30044 214 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 TM4SF1P30408 202 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 CCT6AP40227 531 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PRPHP41219 470 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 GNAQP50148 359 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 CHMP4BP1P59074 171 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PPP4CP60510 307 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 AMPD2Q01433 879 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PDE4CQ08493 712 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 WHAMMP3Q1A5X7 153 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC178Q5BJE1 867 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 RC3H1Q5TC82 1133 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 TBC1D9BQ66K14 1250 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 SPTY2D1Q68D10 685 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 MB21D1Q8N884 522 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 ACRBPQ8NEB7 543 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 DNAJC7Q99615 494 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 NYXQ9GZU5 481 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 THAP9Q9H5L6 903 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 ANKZF1Q9H8Y5 726 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 KBTBD4Q9NVX7 518 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 TAB2Q9NYJ8 693 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 NARFQ9UHQ1 456 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 MAD2L2Q9UI95 211 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 PCDHA8Q9Y5H6 950 aa5.84□□□□□ -1.47
ATPAF1-212ENST00000542495 SBF2Q86WG5 1849 aa5.84□□□□□ -1.48
ATPAF1-212ENST00000542495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CTAGE9A4FU28 777 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PALM3A6NDB9 673 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 C3orf80F5H4A9 247 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 STXBP3O00186 592 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CYTH3O43739 400 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 RHOBTB3O94955 611 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 ABL1P00519 1130 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PARP1P09874 1014 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CDC25AP30304 524 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 KRT9P35527 623 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 STAT6P42226 847 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TFAP4Q01664 338 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 SMC1AQ14683 1233 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 LONRF2Q1L5Z9 754 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 COBLL1Q53SF7 1204 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF569Q5MCW4 686 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 BEND6Q5SZJ8 279 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TTI2Q6NXR4 508 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 SLC35F6Q8N357 371 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 STAG2Q8N3U4 1231 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 GIMAP8Q8ND71 665 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PNMA1Q8ND90 353 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 ANKRD20A12PQ8NF67 263 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 LRRC15Q8TF66 581 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 NOC3LQ8WTT2 800 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 NLRP3Q96P20 1036 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 NAPGQ99747 312 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 LZTS2Q9BRK4 669 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 VPS16Q9H269 839 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TMEM60Q9H2L4 133 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms