RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
KDM3A-216ENST00000542128 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
KDM3A-216ENST00000542128 INTS9Q9NV88 658 aaKnown RBP13.67□□□□□ -0.22
KDM3A-216ENST00000542128 SPHKAPQ2M3C7 1700 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 TPP2P29144 1249 aaPredicted RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 SYNMO15061 1565 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PDHBP11177 359 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 TEKT4Q8WW24 435 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PANX2Q96RD6 677 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 NPR1P16066 1061 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 FERP16591 822 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 SLC1A4P43007 532 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 SH2D3CQ8N5H7 860 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PAGR1Q9BTK6 254 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 NOD2Q9HC29 1040 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CROCC2H7BZ55 1655 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 BACH1O14867 736 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 RPS6KA5O75582 802 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CIB2O75838 187 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 KIF22Q14807 665 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CROCCP2Q86T23 111 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 RNF181Q9P0P0 153 aa13.66□□□□□ -0.22
KDM3A-216ENST00000542128 E9PCH4 1651 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 LSP1P33241 339 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
KDM3A-216ENST00000542128 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
KDM3A-216ENST00000542128 TSG101Q99816 390 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 NOVA2Q9UNW9 492 aaKnown RBP13.65□□□□□ -0.22
KDM3A-216ENST00000542128 UTP11Q9Y3A2 253 aaKnown RBP13.65□□□□□ -0.22
KDM3A-216ENST00000542128 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 CALM1P0DP23 149 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 CALM2P0DP24 149 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 CALM3P0DP25 149 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 MFSD4BQ5TF39 518 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 RTKN2Q8IZC4 609 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 MAPK8IP1Q9UQF2 711 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 SRGAP2O75044 1071 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 RESTQ13127 1097 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 ANKRD42Q8N9B4 389 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 APPBP2Q92624 585 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 RMI1Q9H9A7 625 aa13.65□□□□□ -0.22
KDM3A-216ENST00000542128 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
KDM3A-216ENST00000542128 SEC24CP53992 1094 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 PLCB4Q15147 1175 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 CIAPIN1Q6FI81 312 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 USP44Q9H0E7 712 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 VCPKMTQ9H867 229 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.239e-10■□□□□ 10.2
KDM3A-216ENST00000542128 NARFQ9UHQ1 456 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
KDM3A-216ENST00000542128 GPAA1O43292 621 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 CPP00450 1065 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 GSCP56915 257 aaPredicted RBP13.64□□□□□ -0.23
KDM3A-216ENST00000542128 INF2Q27J81 1249 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 NAA35Q5VZE5 725 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 ARHGAP22Q7Z5H3 698 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 PARD3BQ8TEW8 1205 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 ELAC2Q9BQ52 826 aaKnown RBP13.64□□□□□ -0.23
KDM3A-216ENST00000542128 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 H0Y3Z8 333 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 IQCGQ9H095 443 aaKnown RBP13.64□□□□□ -0.23
KDM3A-216ENST00000542128 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 RGL1Q9NZL6 768 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
KDM3A-216ENST00000542128 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
KDM3A-216ENST00000542128 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
KDM3A-216ENST00000542128 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms