RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 RBM25P49756 843 aaKnown RBP5.87□□□□□ -1.47
LEMD3-204ENST00000542032 CDR1P51861 262 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 CYP4F3Q08477 520 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 NFIXQ14938 502 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 NR1I3Q14994 352 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 SKOR2Q2VWA4 1001 aaPredicted RBP5.87□□□□□ -1.47
LEMD3-204ENST00000542032 OLFML2BQ68BL8 750 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 JAMLQ86YT9 394 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 TRIM59Q8IWR1 403 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.87□□□□□ -1.47
LEMD3-204ENST00000542032 ZNF408Q9H9D4 720 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 SIRT5Q9NXA8 310 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 AKT3Q9Y243 479 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 SUGT1Q9Y2Z0 365 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 IRS2Q9Y4H2 1338 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 CAPNS1P04632 268 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 CYBBP04839 570 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 NAT2P11245 290 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 FBLN1P23142 703 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 EPHB3P54753 998 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 ARID5AQ03989 594 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 DPY19L1Q2PZI1 675 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 PLEKHN1Q494U1 663 aaPredicted RBP5.86□□□□□ -1.47
LEMD3-204ENST00000542032 TMEM132EQ6IEE7 984 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 PAQR3Q6TCH7 311 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 C6orf15Q6UXA7 325 aaPredicted RBP5.86□□□□□ -1.47
LEMD3-204ENST00000542032 LDHDQ86WU2 507 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 FAM178BQ8IXR5 827 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 MICAL1Q8TDZ2 1067 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 EPB41L4AQ9HCS5 686 aaPredicted RBP5.86□□□□□ -1.47
LEMD3-204ENST00000542032 PCDHA5Q9Y5H7 936 aa5.86□□□□□ -1.47
LEMD3-204ENST00000542032 NUDT19A8MXV4 375 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 B2RBV5 119 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 PPP1R11O60927 126 aaPredicted RBP5.85□□□□□ -1.47
LEMD3-204ENST00000542032 KCNH1O95259 989 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 ADRB1P08588 477 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 GLI4P10075 376 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 BMP7P18075 431 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 PAMP19021 973 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 SEPHS1P49903 392 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 SSPNQ14714 243 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 MRM1Q6IN84 353 aaKnown RBP5.85□□□□□ -1.47
LEMD3-204ENST00000542032 POMZP3Q6PJE2 187 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 NPM2Q86SE8 214 aaKnown RBP5.85□□□□□ -1.47
LEMD3-204ENST00000542032 IGDCC3Q8IVU1 814 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 TMEFF1Q8IYR6 380 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 CRACR2BQ8N4Y2 399 aaPredicted RBP5.85□□□□□ -1.47
LEMD3-204ENST00000542032 MZB1Q8WU39 189 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 SIGLEC10Q96LC7 697 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 MMP19Q99542 508 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 MTA3Q9BTC8 594 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 FBLN5Q9UBX5 448 aa5.85□□□□□ -1.47
LEMD3-204ENST00000542032 CNOT6Q9ULM6 557 aaKnown RBP5.85□□□□□ -1.47
LEMD3-204ENST00000542032 TRBV23OR9-2A0A075B6M9 112 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 A0A1W2PQ27 194 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 A0A1W2PQ64 194 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 A0A1W2PQC6 194 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 A0A1W2PQD8 194 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 GTF2IRD2BQ6EKJ0 949 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 ZC3H14Q6PJT7 736 aaKnown RBP5.84□□□□□ -1.47
LEMD3-204ENST00000542032 TMC6Q7Z403 805 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 GTF2IRD2Q86UP8 949 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
LEMD3-204ENST00000542032 C7orf72A4D263 438 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 SUSD5O60279 629 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 SCG5P05408 212 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
LEMD3-204ENST00000542032 SCRN1Q12765 414 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 FXNQ16595 210 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 ZNF385BQ569K4 471 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 LARP1BQ659C4 914 aaKnown RBP5.83□□□□□ -1.48
LEMD3-204ENST00000542032 MBLAC2Q68D91 279 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 NPLOC4Q8TAT6 608 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 DACT3Q96B18 629 aaPredicted RBP5.83□□□□□ -1.48
LEMD3-204ENST00000542032 LGR4Q9BXB1 951 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 IRAK3Q9Y616 596 aa5.83□□□□□ -1.48
LEMD3-204ENST00000542032 NPHP3-ACAD11A0A0J9YXS1 232 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 ARNTLO00327 626 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 NOP56O00567 594 aaKnown RBP5.82□□□□□ -1.48
LEMD3-204ENST00000542032 TBX1O43435 398 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 KLF4O43474 513 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 THBDP07204 575 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 PI3P19957 117 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 TACR1P25103 407 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
LEMD3-204ENST00000542032 RBM10P98175 930 aaKnown RBP5.82□□□□□ -1.48
LEMD3-204ENST00000542032 TESK1Q15569 626 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 ZXDCQ2QGD7 858 aaPredicted RBP5.82□□□□□ -1.48
LEMD3-204ENST00000542032 BICRALQ6AI39 1079 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 ZNF227Q86WZ6 799 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 FAM129CQ86XR2 697 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 PANK1Q8TE04 598 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 FRS2Q8WU20 508 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 IRF2BPLQ9H1B7 796 aa5.82□□□□□ -1.48
LEMD3-204ENST00000542032 GPRC5CQ9NQ84 441 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms