RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 BCS1LQ9Y276 419 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 EPB41P11171 864 aaKnown RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 ICA1Q05084 483 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 PTPAQ15257 358 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 MYO1AQ9UBC5 1043 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 SCAF8Q9UPN6 1271 aaKnown RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 ADGRG1Q9Y653 693 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 BACH1O14867 736 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 EEF2P13639 858 aaKnown RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 TTLL12Q14166 644 aaPredicted RBP17.82■□□□□ 0.44
VARS2-212ENST00000542001 RAD9BQ6WBX8 426 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 STXBP4Q6ZWJ1 553 aa17.82■□□□□ 0.44
VARS2-212ENST00000542001 GOLGA6L7A0A1B0GV03 622 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 LZTS2Q9BRK4 669 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 ADAMTS1Q9UHI8 967 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 NHEJ1Q9H9Q4 299 aaPredicted RBP17.81■□□□□ 0.44
VARS2-212ENST00000542001 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
VARS2-212ENST00000542001 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
VARS2-212ENST00000542001 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 DAAM2Q86T65 1068 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 DPH5Q9H2P9 285 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
VARS2-212ENST00000542001 GJA3Q9Y6H8 435 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 EBAG9O00559 213 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 MIGA2Q7L4E1 593 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 LARGE2Q8N3Y3 721 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 CCDC127Q96BQ5 260 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 PPIP5K2O43314 1243 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 NR2F2P24468 414 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 MAP2K1Q02750 393 aaPredicted RBP17.8■□□□□ 0.44
VARS2-212ENST00000542001 FAM133AQ8N9E0 248 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 TC2NQ8N9U0 490 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
VARS2-212ENST00000542001 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
VARS2-212ENST00000542001 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 KRT5P13647 590 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
VARS2-212ENST00000542001 TNFAIP3P21580 790 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 MNAT1P51948 309 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 TUBE1Q9UJT0 475 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 FRMD4BQ9Y2L6 1034 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 E9PMD0 336 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 NTSR2O95665 410 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 CTNNA2P26232 953 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 GUCY2DQ02846 1103 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 MB21D1Q8N884 522 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 LRRN2O75325 713 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 CCNE1P24864 410 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 VPS41P49754 854 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 KLK7P49862 253 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 PLCB3Q01970 1234 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 RPS6KA1Q15418 735 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 NTRK3Q16288 839 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 CCDC50Q8IVM0 306 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 SH2D3AQ9BRG2 576 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 EHMT1Q9H9B1 1298 aa17.79■□□□□ 0.44
VARS2-212ENST00000542001 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 OPA1O60313 960 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 BRD3Q15059 726 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 IFI16Q16666 785 aaKnown RBP17.78■□□□□ 0.44
VARS2-212ENST00000542001 WHAMMP3Q1A5X7 153 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 PEX26Q7Z412 305 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 DGKHQ86XP1 1220 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 USP17L10C9JJH3 530 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
VARS2-212ENST00000542001 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
VARS2-212ENST00000542001 STAT3P40763 770 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 NCK2O43639 380 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 RAD17O75943 681 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 PRPF6O94906 941 aaKnown RBP17.78■□□□□ 0.44
VARS2-212ENST00000542001 GRAPQ13588 217 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 GRAPLQ8TC17 118 aaPredicted RBP17.78■□□□□ 0.44
VARS2-212ENST00000542001 DDX12PQ92771 950 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 FAM204AQ9H8W3 233 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 CTTNBP2NLQ9P2B4 639 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
VARS2-212ENST00000542001 GAS7O60861 476 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms