RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PDHBP11177 359 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 GRM4Q14833 912 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 CCDC96Q2M329 555 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 MOB2Q70IA6 237 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 PCMTD1Q96MG8 357 aaPredicted RBP8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 GBP4Q96PP9 640 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 ZMYND15Q9H091 742 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 TCP11L1Q9NUJ3 509 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 NID2Q14112 1375 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 PLIN4Q96Q06 1357 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 OTOFQ9HC10 1997 aa8.92□□□□□ -0.98
AC005840.3-201ENST00000541888 BTBD18B2RXH4 712 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 TOP1P11387 765 aaKnown RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 ATP2B1P20020 1258 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 LMOD1P29536 600 aaPredicted RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 RFC5P40937 340 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 MRE11P49959 708 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 NR6A1Q15406 480 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 EARS2Q5JPH6 523 aaKnown RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 SH3RF1Q7Z6J0 888 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 USP48Q86UV5 1035 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 FOXP4Q8IVH2 680 aaPredicted RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 FBXO18Q8NFZ0 1043 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 RASGRP4Q8TDF6 673 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 CDK15Q96Q40 435 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 ATP13A2Q9NQ11 1180 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 LMBRD1Q9NUN5 540 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 ZBTB21Q9ULJ3 1066 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 SOCS7O14512 581 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 CDKL5O76039 1030 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 PARP1P09874 1014 aaKnown RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 PDCP20941 246 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 CPLX2Q6PUV4 134 aaKnown RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 HEATR3Q7Z4Q2 680 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 FAM83AQ86UY5 434 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 GPT2Q8TD30 523 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 PIGSQ96S52 555 aa8.91□□□□□ -0.98
AC005840.3-201ENST00000541888 DOCK1Q14185 1865 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 PHF20L1A8MW92 1017 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 CALM1P0DP23 149 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 CALM2P0DP24 149 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 CALM3P0DP25 149 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 TNNI2P48788 182 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 WWC2Q6AWC2 1192 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 TMEM179Q6ZVK1 233 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 METTL16Q86W50 562 aaKnown RBP8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 ANKS1AQ92625 1134 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 COA7Q96BR5 231 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 USP28Q96RU2 1077 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 WRNIP1Q96S55 665 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 MTA3Q9BTC8 594 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 HERC5Q9UII4 1024 aaKnown RBP8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 CLIC4Q9Y696 253 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 MRVI1Q9Y6F6 885 aa8.9□□□□□ -0.98
AC005840.3-201ENST00000541888 COL2A1P02458 1487 aaPredicted RBP8.9□□□□□ -0.99
AC005840.3-201ENST00000541888 CCDC196A0A1B0GTZ2 297 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 F5H6K3 240 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 TRAK2O60296 914 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 PPP1R11O60927 126 aaPredicted RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 DEXIO95424 95 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 NDUFB10O96000 172 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 KIF5BP33176 963 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 CAP2P40123 477 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 NOVP48745 357 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 KLRC3Q07444 240 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 IKQ13123 557 aaPredicted RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 NNTQ13423 1086 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 GNL2Q13823 731 aaKnown RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 DIS3L2Q8IYB7 885 aaKnown RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ADGRF4Q8IZF3 695 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 CCDC17Q96LX7 622 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 RNF26Q9BY78 433 aaPredicted RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ZNF341Q9BYN7 854 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 KANSL2Q9H9L4 492 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 CABP5Q9NP86 173 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 RBM28Q9NW13 759 aaKnown RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 PHIPQ8WWQ0 1821 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 TRAF5O00463 557 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 PRPF3O43395 683 aaKnown RBP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ADH1CP00326 375 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 MMP1P03956 469 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 XRCC6P12956 609 aaKnown RBP eCLIP8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 SCG2P13521 617 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 PTMSP20962 102 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 EPHX2P34913 555 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 SLC1A4P43007 532 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 ZNF543Q08ER8 600 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 TNFAIP1Q13829 316 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 TRIM29Q14134 588 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 NPY5RQ15761 445 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 FAM83BQ5T0W9 1011 aa8.89□□□□□ -0.99
AC005840.3-201ENST00000541888 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms