RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CSTF2P33240 577 aaKnown RBP eCLIP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ETV3P41162 512 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PEX5P50542 639 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GEMIN4P57678 1058 aaKnown RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GPSM2P81274 684 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ATP11AP98196 1134 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GUCY1B3Q02153 619 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GSTM4Q03013 218 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 MSLNQ13421 630 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 DPYSQ14117 519 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 SAFB2Q14151 953 aaKnown RBP eCLIP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF268Q14587 947 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PPP1R7Q15435 360 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 MEX3CQ5U5Q3 659 aaKnown RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 TWF2Q6IBS0 349 aaKnown RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 IRGCQ6NXR0 463 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 C6orf89Q6UWU4 347 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 TBC1D9Q6ZT07 1266 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF598Q86UK7 904 aaKnown RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GRAMD2AQ8IUY3 354 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC83Q8IWF9 413 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 SPARTQ8N0X7 666 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 CAGE1Q8TC20 777 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 COG1Q8WTW3 980 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ANKRD49Q8WVL7 239 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PTPRN2Q92932 1015 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 C8orf48Q96LL4 319 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 CLIC6Q96NY7 704 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 GBP5Q96PP8 586 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PRAM1Q96QH2 718 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 SPZ1Q9BXG8 430 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ABCB6Q9NP58 842 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 TIMMDC1Q9NPL8 285 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 CDC23Q9UJX2 597 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 TRAF3IP3Q9Y228 551 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 EFR3BQ9Y2G0 817 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC141Q6ZP82 1450 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 HECW1Q76N89 1606 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 HMGXB3Q12766 1538 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 KDM5DQ9BY66 1539 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 MSH6P52701 1360 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ABCC11Q96J66 1382 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CTAGE15A4D2H0 777 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 USP27XA6NNY8 438 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GOLGA8TH3BQL2 631 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TEX28O15482 410 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CUTAO60888 179 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 YEATS4O95619 227 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 SYF2O95926 243 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 S100A6P06703 90 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ZFYP08048 801 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CTAGE8P0CG41 777 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GOLGA8HP0CJ92 632 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PDHBP11177 359 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ACADSP16219 412 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ATP2A2P16615 1042 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PTPN2P17706 415 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GGCXP38435 758 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 HSPA9P38646 679 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 POLE2P56282 527 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GJA9P57773 515 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ELF3P78545 371 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TMF1P82094 1093 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 HSPA14Q0VDF9 509 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TRAP1Q12931 704 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 MTMR3Q13615 1198 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CYLC2Q14093 348 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 KPNB1Q14974 876 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 STX1AQ16623 288 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 C15orf59Q2T9L4 293 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ANO6Q4KMQ2 910 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ZMYM1Q5SVZ6 1142 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 DEPDC1Q5TB30 811 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 NDUFAF5Q5TEU4 345 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 EFCAB2Q5VUJ9 269 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 SPATA1Q5VX52 437 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC102BQ68D86 513 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC62Q6P9F0 684 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 GIMAP6Q6P9H5 292 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TRIM65Q6PJ69 517 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PADI6Q6TGC4 694 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CCBE1Q6UXH8 406 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 PPP1R42Q7Z4L9 355 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CTAGE6Q86UF2 777 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 FAM228AQ86W67 206 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 CTAGE4Q8IX94 777 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 THEMISQ8N1K5 641 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 DCLK2Q8N568 766 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ANKS4BQ8N8V4 417 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 TNIP2Q8NFZ5 429 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 RBM46Q8TBY0 533 aaKnown RBP5.69□□□□□ -1.5
SNHG1-218ENST00000541615 FBF1Q8TES7 1133 aa5.69□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF516Q92618 1163 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms