RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PDLIM7Q9NR12 457 aa6.06□□□□□ -1.44
SNHG1-217ENST00000541578 APEX2Q9UBZ4 518 aa6.06□□□□□ -1.44
SNHG1-217ENST00000541578 EMC9Q9Y3B6 208 aa6.06□□□□□ -1.44
SNHG1-217ENST00000541578 BACE2Q9Y5Z0 518 aa6.06□□□□□ -1.44
SNHG1-217ENST00000541578 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 DDAH1O94760 285 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 KCNH1O95259 989 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 FGRP09769 529 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 MSL3P1P0C860 447 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 CORO7P57737 925 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 BMS1Q14692 1282 aaKnown RBP6.05□□□□□ -1.44
SNHG1-217ENST00000541578 CBX2Q14781 532 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-217ENST00000541578 FXNQ16595 210 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 CIAPIN1Q6FI81 312 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 C6orf15Q6UXA7 325 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-217ENST00000541578 MCF2L2Q86YR7 1114 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 FAM178BQ8IXR5 827 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 NLGN2Q8NFZ4 835 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 PPP1R14AQ96A00 147 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 TRIM55Q9BYV6 548 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 GCM1Q9NP62 436 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 KLHL14Q9P2G3 628 aa6.05□□□□□ -1.44
SNHG1-217ENST00000541578 NPHP3-ACAD11A0A0J9YXS1 232 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 TLDC2A0PJX2 215 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 LINC00310P59036 64 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 RBL2Q08999 1139 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 NR1I3Q14994 352 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 BICRALQ6AI39 1079 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 CNTD2Q9H8S5 307 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 ZNF408Q9H9D4 720 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 MBD1Q9UIS9 605 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-217ENST00000541578 CADPSQ9ULU8 1353 aa6.04□□□□□ -1.44
SNHG1-217ENST00000541578 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 TRBV23OR9-2A0A075B6M9 112 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 PAMP19021 973 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 RPTNQ6XPR3 784 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 TMC6Q7Z403 805 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 C1QL4Q86Z23 238 aa6.03□□□□□ -1.44
SNHG1-217ENST00000541578 CNOT6Q9ULM6 557 aaKnown RBP6.03□□□□□ -1.44
SNHG1-217ENST00000541578 NUAK1O60285 661 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 CYBBP04839 570 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 ZSCAN22P10073 491 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-217ENST00000541578 TACR1P25103 407 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 MAPKAPK2P49137 400 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 RBM10P98175 930 aaKnown RBP6.02□□□□□ -1.45
SNHG1-217ENST00000541578 SV2CQ496J9 727 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 GTF2IRD2BQ6EKJ0 949 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 PAQR3Q6TCH7 311 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 GTF2IRD2Q86UP8 949 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 CPNE8Q86YQ8 564 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 SIAH1Q8IUQ4 282 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 TRIM59Q8IWR1 403 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 LZTR1Q8N653 840 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 MICAL1Q8TDZ2 1067 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 MRGPRX3Q96LB0 322 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 SIGLEC10Q96LC7 697 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 CYP26B1Q9NR63 512 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 LRP2BPQ9P2M1 347 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 IRAK3Q9Y616 596 aa6.02□□□□□ -1.45
SNHG1-217ENST00000541578 B2RBV5 119 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 N4BP3O15049 544 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 SRGAP3O43295 1099 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 SCRN1Q12765 414 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 ZNF385BQ569K4 471 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 NBPF6Q5VWK0 638 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 SDE2Q6IQ49 451 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 AMIGO3Q86WK7 504 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 LDHDQ86WU2 507 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 MZB1Q8WU39 189 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 NBPF4Q96M43 638 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 LGR4Q9BXB1 951 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 IRF2BPLQ9H1B7 796 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 GPRC5CQ9NQ84 441 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 CLEC1BQ9P126 229 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 KCTD3Q9Y597 815 aa6.01□□□□□ -1.45
SNHG1-217ENST00000541578 F8W031 263 aaPredicted RBP6□□□□□ -1.45
SNHG1-217ENST00000541578 RFXAPO00287 272 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 SUSD5O60279 629 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 NPHS1O60500 1241 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 ITGAVP06756 1048 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 DBHP09172 617 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 PLS3P13797 630 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 CDR1P51861 262 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 EPHB3P54753 998 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 PLEKHN1Q494U1 663 aaPredicted RBP6□□□□□ -1.45
SNHG1-217ENST00000541578 ZC3H14Q6PJT7 736 aaKnown RBP6□□□□□ -1.45
SNHG1-217ENST00000541578 LCNL1Q6ZST4 164 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 ANKS3Q6ZW76 656 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 CABP7Q86V35 215 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 COPS5Q92905 334 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
SNHG1-217ENST00000541578 DBR1Q9UK59 544 aaKnown RBP6□□□□□ -1.45
SNHG1-217ENST00000541578 C7orf72A4D263 438 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 PPP1R11O60927 126 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-217ENST00000541578 GJB6O95452 261 aa5.99□□□□□ -1.45
SNHG1-217ENST00000541578 HOXC12P31275 282 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms