RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 SYNRGQ9UMZ2 1314 aa22.72■■□□□ 1.23
OTUB1-210ENST00000541478 USP11P51784 963 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 PDIA5Q14554 519 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 ZNF658Q5TYW1 1059 aaPredicted RBP22.71■■□□□ 1.23
OTUB1-210ENST00000541478 ANO3Q9BYT9 981 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 LRWD1Q9UFC0 647 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 PGAP2Q9UHJ9 254 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 PRR12Q9ULL5 1215 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 FOSP01100 380 aaPredicted RBP22.71■■□□□ 1.23
OTUB1-210ENST00000541478 PLCG1P19174 1290 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 CDK11BP21127 795 aaKnown RBP22.71■■□□□ 1.23
OTUB1-210ENST00000541478 AMPD3Q01432 767 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 RASA3Q14644 834 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 NOLC1Q14978 699 aaKnown RBP eCLIP22.71■■□□□ 1.23
OTUB1-210ENST00000541478 LRRC8AQ8IWT6 810 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 ACER1Q8TDN7 264 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 CHURC1Q8WUH1 139 aa22.71■■□□□ 1.23
OTUB1-210ENST00000541478 USP17L15C9J2P7 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L13C9JLJ4 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L11C9JVI0 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L18D6R9N7 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L22D6RA61 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L17D6RBQ6 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L19D6RCP7 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L20D6RJB6 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 EDIL3O43854 480 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 ZNF18P17022 549 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L24Q0WX57 530 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 KCNB1Q14721 858 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 SPATA1Q5VX52 437 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 USP17L6PQ6QN14 398 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 MOXD1Q6UVY6 613 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
OTUB1-210ENST00000541478 TRMT44Q8IYL2 757 aaKnown RBP22.7■■□□□ 1.22
OTUB1-210ENST00000541478 CCDC47Q96A33 483 aaKnown RBP22.7■■□□□ 1.22
OTUB1-210ENST00000541478 MARCH6O60337 910 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 PLA2G6O60733 806 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 USH1GQ495M9 461 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 KLHL10Q6JEL2 608 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 CCDC150Q8NCX0 1101 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 CACTINQ8WUQ7 758 aaKnown RBP22.69■■□□□ 1.22
OTUB1-210ENST00000541478 SPTLC3Q9NUV7 552 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 PYCARDQ9ULZ3 195 aa22.69■■□□□ 1.22
OTUB1-210ENST00000541478 FZD9O00144 591 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 MEIS2O14770 477 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 FAM83BQ5T0W9 1011 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 TMC6Q7Z403 805 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 FAM160B2Q86V87 743 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 MICALL2Q8IY33 904 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 CDK5RAP3Q96JB5 506 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 GTPBP4Q9BZE4 634 aaKnown RBP22.68■■□□□ 1.22
OTUB1-210ENST00000541478 GINM1Q9NU53 330 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 STK17AQ9UEE5 414 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 SHTN1A0MZ66 631 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 SPDYE3A6NKU9 549 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 PPP1R3GB7ZBB8 358 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 CD44P16070 742 aaKnown RBP22.68■■□□□ 1.22
OTUB1-210ENST00000541478 GMPSP49915 693 aaPredicted RBP22.68■■□□□ 1.22
OTUB1-210ENST00000541478 RASSF7Q02833 373 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 LRMPQ12912 555 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 KRT79Q5XKE5 535 aa22.68■■□□□ 1.22
OTUB1-210ENST00000541478 MYH7BA7E2Y1 1941 aa22.67■■□□□ 1.22
OTUB1-210ENST00000541478 PLIN2Q99541 437 aa22.67■■□□□ 1.22
OTUB1-210ENST00000541478 MMTAG2Q9BU76 263 aaKnown RBP22.67■■□□□ 1.22
OTUB1-210ENST00000541478 CYP3A7-CYP3A51PA0A087WV96 503 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 NRDCO43847 1150 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 CYP3A7P24462 503 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 SNAP25P60880 206 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 PAK1Q13153 545 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 SMYD4Q8IYR2 804 aaPredicted RBP22.66■■□□□ 1.22
OTUB1-210ENST00000541478 RWDD2AQ9UIY3 292 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 GJA3Q9Y6H8 435 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 STIM1Q13586 685 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 TPD52L1Q16890 204 aaPredicted RBP22.66■■□□□ 1.22
OTUB1-210ENST00000541478 CNOT7Q9UIV1 285 aaKnown RBP22.66■■□□□ 1.22
OTUB1-210ENST00000541478 FEM1BQ9UK73 627 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 CTNND2Q9UQB3 1225 aa22.66■■□□□ 1.22
OTUB1-210ENST00000541478 PIK3CDO00329 1044 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 RHOBTB3O94955 611 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 ARHGAP4P98171 946 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 KIAA1755Q5JYT7 1200 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 SLFN12Q8IYM2 578 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 SNX29Q8TEQ0 813 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 MBOAT7Q96N66 472 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 MED15Q96RN5 788 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 CTAGE1Q96RT6 745 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 FEZ1Q99689 392 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 RANBP17Q9H2T7 1088 aaKnown RBP22.65■■□□□ 1.22
OTUB1-210ENST00000541478 PCDHA12Q9UN75 941 aa22.65■■□□□ 1.22
OTUB1-210ENST00000541478 POTEMA6NI47 508 aa22.64■■□□□ 1.22
OTUB1-210ENST00000541478 SFPQP23246 707 aaKnown RBP eCLIP22.64■■□□□ 1.22
OTUB1-210ENST00000541478 HAS1Q92839 578 aa22.64■■□□□ 1.22
OTUB1-210ENST00000541478 TEPSINQ96N21 525 aa22.64■■□□□ 1.22
OTUB1-210ENST00000541478 C7orf25Q9BPX7 421 aa22.64■■□□□ 1.22
OTUB1-210ENST00000541478 TRIM9Q9C026 710 aa22.64■■□□□ 1.22
OTUB1-210ENST00000541478 SAMSN1Q9NSI8 373 aaKnown RBP22.64■■□□□ 1.22
OTUB1-210ENST00000541478 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
OTUB1-210ENST00000541478 SLC26A4O43511 780 aa22.64■■□□□ 1.21
OTUB1-210ENST00000541478 EGFRP00533 1210 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms