RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GVINP1Q7Z2Y8 2422 aa11.42□□□□□ -0.58
YBX3-211ENST00000541351 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 TANC1Q9C0D5 1861 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 CXCL10P02778 98 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
YBX3-211ENST00000541351 SDHBP21912 280 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 ICAM3P32942 547 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 LTBRP36941 435 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 NDUFV1P49821 464 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 G3BP1Q13283 466 aaKnown RBP eCLIP11.41□□□□□ -0.58
YBX3-211ENST00000541351 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
YBX3-211ENST00000541351 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 FAM117BQ6P1L5 589 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 LRRC8DQ7L1W4 858 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 RIPOR3Q96MK2 946 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 C11orf84Q9BUA3 381 aaPredicted RBP11.41□□□□□ -0.58
YBX3-211ENST00000541351 ACAD9Q9H845 621 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
YBX3-211ENST00000541351 BAHCC1Q9P281 2608 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 EMSYQ7Z589 1322 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 SCN5AQ14524 2016 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
YBX3-211ENST00000541351 SRGAP3O43295 1099 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 EYA4O95677 639 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 RB1P06400 928 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 PTGISQ16647 500 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 ST3GAL2Q16842 350 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 FRMD5Q7Z6J6 570 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
YBX3-211ENST00000541351 RMDN1Q96DB5 314 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 ASIC4Q96FT7 647 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.58
YBX3-211ENST00000541351 MPHOSPH6Q99547 160 aaKnown RBP11.4□□□□□ -0.58
YBX3-211ENST00000541351 SMC4Q9NTJ3 1288 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
YBX3-211ENST00000541351 COL4A6Q14031 1691 aa11.4□□□□□ -0.59
YBX3-211ENST00000541351 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
YBX3-211ENST00000541351 TRIOO75962 3097 aa11.39□□□□□ -0.59
YBX3-211ENST00000541351 EEF2P13639 858 aaKnown RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 HTRA4P83105 476 aaPredicted RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 TMCO2Q7Z6W1 182 aaPredicted RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 MYOCDQ8IZQ8 938 aa11.39□□□□□ -0.59
YBX3-211ENST00000541351 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 KCNG4Q8TDN1 519 aa11.39□□□□□ -0.59
YBX3-211ENST00000541351 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
YBX3-211ENST00000541351 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
YBX3-211ENST00000541351 ACACBO00763 2458 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 PARP14Q460N5 1801 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 RBL2Q08999 1139 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
YBX3-211ENST00000541351 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 UBALD2Q8IYN6 164 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 OR6J1Q8NGC5 347 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 FGD4Q96M96 766 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 SLC38A10Q9HBR0 1119 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 GPR108Q9NPR9 543 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
YBX3-211ENST00000541351 KMT2BQ9UMN6 2715 aaPredicted RBP11.38□□□□□ -0.59
YBX3-211ENST00000541351 NCOR2Q9Y618 2525 aa11.38□□□□□ -0.59
YBX3-211ENST00000541351 GNAI3P08754 354 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 AKR1B1P15121 316 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 CNTN2Q02246 1040 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 HYAL1Q12794 435 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 FBXO16Q8IX29 292 aaPredicted RBP11.37□□□□□ -0.59
YBX3-211ENST00000541351 SMRP1Q8NCR6 262 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 COL26A1Q96A83 441 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 MFSD1Q9H3U5 465 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 RAVER2Q9HCJ3 691 aaKnown RBP11.37□□□□□ -0.59
YBX3-211ENST00000541351 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 ATRXP46100 2492 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 MCM3APO60318 1980 aa11.37□□□□□ -0.59
YBX3-211ENST00000541351 TBX10O75333 385 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 LGR5O75473 907 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 LMNAP02545 664 aaKnown RBP11.36□□□□□ -0.59
YBX3-211ENST00000541351 ATF7P17544 494 aaPredicted RBP11.36□□□□□ -0.59
YBX3-211ENST00000541351 CTNNB1P35222 781 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 ZAP70P43403 619 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 COASYQ13057 564 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 MTX1Q13505 466 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 TAPT1Q6NXT6 567 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 SESTD1Q86VW0 696 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
YBX3-211ENST00000541351 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms