RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ZMYM6O95789 1325 aa19.13■□□□□ 0.65
TRIM65-203ENST00000540812 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
TRIM65-203ENST00000540812 PTPDC1A2A3K4 754 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 AKNAD1Q5T1N1 836 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 PSRC1Q6PGN9 363 aaPredicted RBP19.12■□□□□ 0.65
TRIM65-203ENST00000540812 SLC30A10Q6XR72 485 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 RILPL2Q969X0 211 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 HIPK3Q9H422 1215 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 IL23AQ9NPF7 189 aa19.12■□□□□ 0.65
TRIM65-203ENST00000540812 B4GALT4O60513 344 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 CALML3P27482 149 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 ZNF543Q08ER8 600 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 MFSD6Q6ZSS7 791 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 TICAM2Q86XR7 235 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 USP38Q8NB14 1042 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 CXXC1Q9P0U4 656 aaPredicted RBP19.11■□□□□ 0.65
TRIM65-203ENST00000540812 ADD3Q9UEY8 706 aaKnown RBP19.11■□□□□ 0.65
TRIM65-203ENST00000540812 TTC28Q96AY4 2481 aa19.11■□□□□ 0.65
TRIM65-203ENST00000540812 NEDD4P46934 1319 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 SNHG28P0DPA3 235 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 CCL23P55773 120 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 HERVK_113Q902F9 699 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 TTC14Q96N46 770 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 NOC4LQ9BVI4 516 aaKnown RBP19.1■□□□□ 0.65
TRIM65-203ENST00000540812 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
TRIM65-203ENST00000540812 RBM47A0AV96 593 aaKnown RBP19.09■□□□□ 0.65
TRIM65-203ENST00000540812 SDSP20132 328 aa19.09■□□□□ 0.65
TRIM65-203ENST00000540812 RNF207Q6ZRF8 634 aa19.09■□□□□ 0.65
TRIM65-203ENST00000540812 WNT8AQ9H1J5 351 aa19.09■□□□□ 0.65
TRIM65-203ENST00000540812 CPVLQ9H3G5 476 aa19.09■□□□□ 0.65
TRIM65-203ENST00000540812 MYO9BQ13459 2157 aa19.09■□□□□ 0.65
TRIM65-203ENST00000540812 CHD7Q9P2D1 2997 aa19.08■□□□□ 0.65
TRIM65-203ENST00000540812 MUC3AQ02505 3323 aa19.08■□□□□ 0.65
TRIM65-203ENST00000540812 LOC102724159A0A0B4J2E5 919 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 GOLGA8HP0CJ92 632 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 PCP11498 1178 aaKnown RBP19.08■□□□□ 0.64
TRIM65-203ENST00000540812 RPS6P62753 249 aaKnown RBP19.08■□□□□ 0.64
TRIM65-203ENST00000540812 PWP2Q15269 919 aaKnown RBP19.08■□□□□ 0.64
TRIM65-203ENST00000540812 SMC5Q8IY18 1101 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 OR6J1Q8NGC5 347 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 VWCEQ96DN2 955 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 SEZ6LQ9BYH1 1024 aa19.08■□□□□ 0.64
TRIM65-203ENST00000540812 ALDH8A1Q9H2A2 487 aaPredicted RBP19.08■□□□□ 0.64
TRIM65-203ENST00000540812 WDR19Q8NEZ3 1342 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 FGBP02675 491 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 MYL3P08590 195 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 OTOP2Q7RTS6 562 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 PLEKHM2Q8IWE5 1019 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 COPS5Q92905 334 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 SCLYQ96I15 445 aa19.07■□□□□ 0.64
TRIM65-203ENST00000540812 RNF41Q9H4P4 317 aaPredicted RBP19.07■□□□□ 0.64
TRIM65-203ENST00000540812 TRMT13Q9NUP7 481 aaKnown RBP19.07■□□□□ 0.64
TRIM65-203ENST00000540812 IGHDP01880 384 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 EDNRBP24530 442 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
TRIM65-203ENST00000540812 PDE4DQ08499 809 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 USH1GQ495M9 461 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 CHD1LQ86WJ1 897 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 PPP1R13LQ8WUF5 828 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 ESR2Q92731 530 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 UBA5Q9GZZ9 404 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 PRDM12Q9H4Q4 367 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 POLR3EQ9NVU0 708 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 PNMA2Q9UL42 364 aa19.06■□□□□ 0.64
TRIM65-203ENST00000540812 ZNF213O14771 459 aa19.05■□□□□ 0.64
TRIM65-203ENST00000540812 CYP2C9P11712 490 aa19.05■□□□□ 0.64
TRIM65-203ENST00000540812 CPT1AP50416 773 aa19.05■□□□□ 0.64
TRIM65-203ENST00000540812 MFAP1P55081 439 aaKnown RBP19.05■□□□□ 0.64
TRIM65-203ENST00000540812 CWC27Q6UX04 472 aaKnown RBP19.05■□□□□ 0.64
TRIM65-203ENST00000540812 MTG1Q9BT17 334 aaPredicted RBP19.05■□□□□ 0.64
TRIM65-203ENST00000540812 NKX2-4Q9H2Z4 354 aa19.05■□□□□ 0.64
TRIM65-203ENST00000540812 RWDD1Q9H446 243 aaPredicted RBP19.05■□□□□ 0.64
TRIM65-203ENST00000540812 PRDM6Q9NQX0 595 aa19.05■□□□□ 0.64
TRIM65-203ENST00000540812 YBX2Q9Y2T7 364 aaKnown RBP19.05■□□□□ 0.64
TRIM65-203ENST00000540812 TNKSO95271 1327 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 NUCB1Q02818 461 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 PPP2R5BQ15173 497 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 RAB30Q15771 203 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
TRIM65-203ENST00000540812 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 DNERQ8NFT8 737 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 SCFD2Q8WU76 684 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 TBC1D5Q92609 795 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 MTIF3Q9H2K0 278 aaKnown RBP19.04■□□□□ 0.64
TRIM65-203ENST00000540812 OSBPL3Q9H4L5 887 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 MSRAQ9UJ68 235 aa19.04■□□□□ 0.64
TRIM65-203ENST00000540812 B4E1Z4 1266 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 KDM4AO75164 1064 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 ARIH2O95376 493 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 RABGGTBP53611 331 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 ADGRE1Q14246 886 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 CDC37Q16543 378 aaPredicted RBP19.03■□□□□ 0.64
TRIM65-203ENST00000540812 NBPF20Q3BBV1 942 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
TRIM65-203ENST00000540812 GAS2L1Q99501 681 aaPredicted RBP19.03■□□□□ 0.64
TRIM65-203ENST00000540812 SCN10AQ9Y5Y9 1956 aa19.02■□□□□ 0.64
TRIM65-203ENST00000540812 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.645e-12■■■■■ 46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms