RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 DDX49Q9Y6V7 483 aaKnown RBP14.4□□□□□ -0.1
YBX3-207ENST00000539204 SCN5AQ14524 2016 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 LINC01553A4QN01 128 aa14.39□□□□□ -0.11
YBX3-207ENST00000539204 GJB5O95377 273 aa14.39□□□□□ -0.11
YBX3-207ENST00000539204 TKFCQ3LXA3 575 aa14.39□□□□□ -0.11
YBX3-207ENST00000539204 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
YBX3-207ENST00000539204 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
YBX3-207ENST00000539204 C1orf115Q9H7X2 142 aa14.39□□□□□ -0.11
YBX3-207ENST00000539204 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 KPNA6O60684 536 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 BMP3P12645 472 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 ALAS1P13196 640 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 ADD2P35612 726 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 PTPN5P54829 565 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 ZP2Q05996 745 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 PTPROQ16827 1216 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 TMEM57Q8N5G2 664 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
YBX3-207ENST00000539204 ABHD14A-ACY1A0A1B0GW23 586 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 TMEM232C9JQI7 657 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 PARNO95453 639 aaKnown RBP14.37□□□□□ -0.11
YBX3-207ENST00000539204 RASA1P20936 1047 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 DEFB103AP81534 67 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 PTGISQ16647 500 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 SLFN13Q68D06 897 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 ADHFE1Q8IWW8 467 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 STK11IPQ8N1F8 1099 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 CAGE1Q8TC20 777 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 MORC4Q8TE76 937 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 AFAP1L1Q8TED9 768 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 PPP1R13LQ8WUF5 828 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 CHURC1Q8WUH1 139 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
YBX3-207ENST00000539204 PRRX2Q99811 253 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.11
YBX3-207ENST00000539204 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 ARPP21Q9UBL0 812 aaPredicted RBP14.37□□□□□ -0.11
YBX3-207ENST00000539204 ISY1Q9ULR0 285 aaKnown RBP14.37□□□□□ -0.11
YBX3-207ENST00000539204 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
YBX3-207ENST00000539204 TET1Q8NFU7 2136 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 EFCAB14O75071 495 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 STAT2P52630 851 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 IKQ13123 557 aaPredicted RBP14.36□□□□□ -0.11
YBX3-207ENST00000539204 IKBKEQ14164 716 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 GPNMBQ14956 572 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 FAM117BQ6P1L5 589 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 ZNF444Q8N0Y2 327 aaPredicted RBP14.36□□□□□ -0.11
YBX3-207ENST00000539204 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 PABPC5Q96DU9 382 aaKnown RBP14.36□□□□□ -0.11
YBX3-207ENST00000539204 IL1RAPL2Q9NP60 686 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 ADD3Q9UEY8 706 aaKnown RBP14.36□□□□□ -0.11
YBX3-207ENST00000539204 INSL6Q9Y581 213 aa14.36□□□□□ -0.11
YBX3-207ENST00000539204 CFAP54Q96N23 3096 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 ZNF318Q5VUA4 2279 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 TRIOO75962 3097 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 TTLL1O95922 423 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 SELPP16109 830 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 IRS1P35568 1242 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 CHMP4BP1P59074 171 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 UBE3CQ15386 1083 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 PKN1Q16512 942 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 NSMFQ6X4W1 530 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 CLASRPQ8N2M8 674 aaKnown RBP14.35□□□□□ -0.11
YBX3-207ENST00000539204 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 PRSS33Q8NF86 280 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 MTMR4Q9NYA4 1195 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 RAD50Q92878 1312 aa14.35□□□□□ -0.11
YBX3-207ENST00000539204 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
YBX3-207ENST00000539204 COL4A4P53420 1690 aaPredicted RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 IGKV6D-41A0A0C4DH26 115 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 RBM47A0AV96 593 aaKnown RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 A6NJR5 290 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 NKRFO15226 690 aaKnown RBP eCLIP14.34□□□□□ -0.11
YBX3-207ENST00000539204 IFIT2P09913 472 aaKnown RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 HSP90AB4PQ58FF6 505 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 HERC4Q5GLZ8 1057 aaPredicted RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 IER5LQ5T953 404 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 BMP8AQ7Z5Y6 402 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 CEP95Q96GE4 821 aa14.34□□□□□ -0.11
YBX3-207ENST00000539204 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
YBX3-207ENST00000539204 ZNF287Q9HBT7 754 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms