RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 LCORQ96JN0 433 aaPredicted RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 RHOVQ96L33 236 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 SLC6A18Q96N87 628 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 C11orf84Q9BUA3 381 aaPredicted RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 BRMS1Q9HCU9 246 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 JADE2Q9NQC1 790 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 FBLN5Q9UBX5 448 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 RWDD3Q9Y3V2 267 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 TNFRSF18Q9Y5U5 241 aa3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 WDR33Q9C0J8 1336 aaKnown RBP3.63□□□□□ -1.83
CBX3P4-201ENST00000538909 FAM86C2PA6NEL3 165 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 L1CAMP32004 1257 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 CORO7P57737 925 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 NANOS3P60323 173 aaKnown RBP3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 R3HDM1Q15032 1099 aaKnown RBP3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 SURF1Q15526 300 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 DNERQ8NFT8 737 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 ATG4CQ96DT6 458 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 PEX11GQ96HA9 241 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 PTCHD1Q96NR3 888 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 WWC2-AS2Q96NR7 200 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 CNNM2Q9H8M5 875 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 NUDT5Q9UKK9 219 aa3.62□□□□□ -1.83
CBX3P4-201ENST00000538909 TBC1D8O95759 1140 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 IFNGR1P15260 489 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 TRIM26Q12899 539 aaPredicted RBP3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 SLC9A5Q14940 896 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 CWF19L2Q2TBE0 894 aaKnown RBP3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 CDCP2Q5VXM1 449 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 IGFL4Q6B9Z1 124 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 NLRC3Q7RTR2 1065 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 PLEKHH3Q7Z736 793 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 RELL1Q8IUW5 271 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 FAM26EQ8N5C1 309 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 LZTR1Q8N653 840 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 KYQ8NBH2 561 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 RGS22Q8NE09 1264 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 BRF1Q92994 677 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 TMEM74Q96NL1 305 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 CEP89Q96ST8 783 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 PTPN18Q99952 460 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 IKZF4Q9H2S9 585 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 SIT1Q9Y3P8 196 aa3.61□□□□□ -1.83
CBX3P4-201ENST00000538909 CYP1A1P04798 512 aaPredicted RBP3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 CD3EP07766 207 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 ST13P50502 369 aaKnown RBP3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 ABHD18Q0P651 414 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 CD300LDQ6UXZ3 194 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 CCDC144CPQ8IYA2 1237 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 C7orf61Q8IZ16 206 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 NAF1Q96HR8 494 aaKnown RBP3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 FCRL3Q96P31 734 aaPredicted RBP3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 PRR13Q9NZ81 148 aa3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 GNEQ9Y223 722 aaKnown RBP3.6□□□□□ -1.83
CBX3P4-201ENST00000538909 C9IYK1 514 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 SHOXO15266 292 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 ZNF623O75123 536 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 ZNF202O95125 648 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 LMO1P25800 156 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 NOP2P46087 812 aaKnown RBP3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 FOXE3Q13461 319 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 NOL9Q5SY16 702 aaKnown RBP3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 PRAMEF18Q5VWM3 479 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 TDRD10Q5VZ19 366 aaKnown RBP3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 FAM196AQ6ZSG2 479 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 DNAJC10Q8IXB1 793 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 TTLL6Q8N841 843 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 NETO2Q8NC67 525 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 NLGN2Q8NFZ4 835 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 SRRTQ9BXP5 876 aaKnown RBP3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 CSRNP2Q9H175 543 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 GULP1Q9UBP9 304 aa3.59□□□□□ -1.83
CBX3P4-201ENST00000538909 ZBTB7AO95365 584 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 NME1P15531 152 aaKnown RBP3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 GARTP22102 1010 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 CCNFP41002 786 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 ITGA1P56199 1179 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 PPP2CBP62714 309 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 PPP2CAP67775 309 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 NRN1LQ496H8 165 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 ETV3LQ6ZN32 361 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 ARHGEF18Q6ZSZ5 1173 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 USP33Q8TEY7 942 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 ZDHHC15Q96MV8 337 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 TRIM8Q9BZR9 551 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 FAM86C1Q9NVL1 165 aa3.58□□□□□ -1.84
CBX3P4-201ENST00000538909 C9orf118A6NHY6 69 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 PATE3B3GLJ2 98 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 PPP1R11O60927 126 aaPredicted RBP3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 PPFIA2O75334 1257 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 ATE1O95260 518 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 CTSHP09668 335 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 EPHB4P54760 987 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 ZNF445P59923 1031 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 CLCQ05315 142 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 PSMD2Q13200 908 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 PRR31Q5SQ13 230 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 ZCCHC6Q5VYS8 1495 aaKnown RBP3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 DCAF15Q66K64 600 aa3.57□□□□□ -1.84
CBX3P4-201ENST00000538909 WWC2Q6AWC2 1192 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms