RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 LRRC15Q8TF66 581 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 STAMQ92783 540 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 CCDC51Q96ER9 411 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 RRP36Q96EU6 259 aaKnown RBP10.42□□□□□ -0.74
DDB1-211ENST00000538280 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 ZNF408Q9H9D4 720 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 C6orf50Q9HD87 102 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 MTMR4Q9NYA4 1195 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
DDB1-211ENST00000538280 SMCO2A6NFE2 343 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 C6orf229H3BNL8 230 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 MFAP3LO75121 409 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 RAD17O75943 681 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 EGFRP00533 1210 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 PDHBP11177 359 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 ECE1P42892 770 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 RGS19P49795 217 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 ADKP55263 362 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 FKBP1AP62942 108 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 GTF2IP78347 998 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 MLLT1Q03111 559 aaPredicted RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 KRT31Q15323 416 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 FILIP1LQ4L180 1135 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 NEK8Q86SG6 692 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 UBE2Q2Q8WVN8 375 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 NELFBQ8WX92 580 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 PIGSQ96S52 555 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 DDX4Q9NQI0 724 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 ADARB2Q9NS39 739 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDB1-211ENST00000538280 PSME4Q14997 1843 aa10.41□□□□□ -0.74
DDB1-211ENST00000538280 BAZ2BQ9UIF8 2168 aaKnown RBP10.41□□□□□ -0.74
DDB1-211ENST00000538280 PP2D1A8MPX8 630 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 USP17L5A8MUK1 530 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 H7C1D1 291 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 EDIL3O43854 480 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 AKR1B1P15121 316 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 PRCPP42785 496 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 TRIM14Q14142 442 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 NAA30Q147X3 362 aaPredicted RBP10.4□□□□□ -0.74
DDB1-211ENST00000538280 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 GLIPR1L2Q4G1C9 344 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 CIAPIN1Q6FI81 312 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 TOGARAM2Q6ZUX3 1019 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 CABP7Q86V35 215 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 IRF2BP1Q8IU81 584 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 IGSF22Q8N9C0 903 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 ZNF397Q8NF99 534 aaPredicted RBP10.4□□□□□ -0.74
DDB1-211ENST00000538280 NOC3LQ8WTT2 800 aaKnown RBP10.4□□□□□ -0.74
DDB1-211ENST00000538280 MTMR8Q96EF0 704 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 MTMR9Q96QG7 549 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 C7orf25Q9BPX7 421 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 SRRTQ9BXP5 876 aaKnown RBP10.4□□□□□ -0.74
DDB1-211ENST00000538280 GTPBP4Q9BZE4 634 aaKnown RBP10.4□□□□□ -0.74
DDB1-211ENST00000538280 EHD4Q9H223 541 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 CPVLQ9H3G5 476 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 DNAI1Q9UI46 699 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 GDAQ9Y2T3 454 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
DDB1-211ENST00000538280 GYPCP04921 128 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 CDC25AP30304 524 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
DDB1-211ENST00000538280 SHMT1P34896 483 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 UBA7P41226 1012 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 PPP1R2P41236 205 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 CLK2P49760 499 aaKnown RBP10.39□□□□□ -0.75
DDB1-211ENST00000538280 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.753e-7■■■■■ 34.1
DDB1-211ENST00000538280 RBL2Q08999 1139 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 TCP11X2Q5H9J9 407 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 CNGA4Q8IV77 575 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 KIFC2Q96AC6 838 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 FEZ1Q99689 392 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 MMTAG2Q9BU76 263 aaKnown RBP10.39□□□□□ -0.75
DDB1-211ENST00000538280 MRIQ9BWK5 157 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 THAP9Q9H5L6 903 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 SEC63Q9UGP8 760 aaKnown RBP10.39□□□□□ -0.75
DDB1-211ENST00000538280 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
DDB1-211ENST00000538280 ZBTB12Q9Y330 459 aaPredicted RBP10.39□□□□□ -0.75
DDB1-211ENST00000538280 COL2A1P02458 1487 aaPredicted RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 A0A1W2PQC6 194 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 KCNJ18B7U540 433 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 H2AFXP16104 143 aaPredicted RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 PLCG1P19174 1290 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 MAP2K2P36507 400 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 FXR1P51114 621 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■■□ 20.8
DDB1-211ENST00000538280 DGKZQ13574 1117 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 KCNJ12Q14500 433 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 TTI2Q6NXR4 508 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 CDC42EP5Q6NZY7 148 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms