RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CNGA4Q8IV77 575 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 VPS16Q9H269 839 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 STK17AQ9UEE5 414 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 DNAI1Q9UI46 699 aa12.82□□□□□ -0.36
SLC28A1-204ENST00000538177 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 TRIM49BA6NDI0 452 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 CHRNA5P30532 468 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 CASP14P31944 242 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 TRIM14Q14142 442 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 SIAH1Q8IUQ4 282 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 GLT8D2Q9H1C3 349 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 BLOC1S4Q9NUP1 217 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 MYH4Q9Y623 1939 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 GCFC2P16383 781 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 TNNI2P48788 182 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 ASIC1P78348 528 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 PDE4DQ08499 809 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 UBE2SQ16763 222 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 CPLX3Q8WVH0 158 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
SLC28A1-204ENST00000538177 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 TPM1P09493 284 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 CCNE1P24864 410 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 STK4Q13043 487 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 AOC3Q16853 763 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 TMEM179Q6ZVK1 233 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 SV2BQ7L1I2 683 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 PVALEFA0A1B0GWK0 134 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 LGALS16A8MUM7 142 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 FANCGO15287 622 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ENTPD3O75355 529 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 RXRBP28702 533 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 SLC1A4P43007 532 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 MTF1Q14872 753 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 CNNM4Q6P4Q7 775 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 P2RX5Q93086 422 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 NAP1L4Q99733 375 aaKnown RBP12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
SLC28A1-204ENST00000538177 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 CCDC175P0C221 793 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 UBXN1Q04323 297 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 SEPT2Q15019 361 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 TMEM119Q4V9L6 283 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 MB21D1Q8N884 522 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 HAS1Q92839 578 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 DDX25Q9UHL0 483 aaKnown RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 MYMKA6NI61 221 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 HOXA7P31268 230 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 ICA1Q05084 483 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 MCM6Q14566 821 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 SLC15A2Q16348 729 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 TMTC1Q8IUR5 882 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 GMCL1P1Q8NEA9 526 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 LARP4BQ92615 738 aaKnown RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 RAD54LQ92698 747 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 CDK5RAP3Q96JB5 506 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 DESI2Q9BSY9 194 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
SLC28A1-204ENST00000538177 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-204ENST00000538177 POTEMA6NI47 508 aa12.78□□□□□ -0.36
SLC28A1-204ENST00000538177 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
SLC28A1-204ENST00000538177 FCER1AP12319 257 aa12.78□□□□□ -0.36
SLC28A1-204ENST00000538177 USP11P51784 963 aa12.78□□□□□ -0.36
SLC28A1-204ENST00000538177 GNG11P61952 73 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms