RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 HHIPL1Q96JK4 782 aa7.14□□□□□ -1.27
DDB1-210ENST00000538129 CCDC136Q96JN2 1154 aa7.14□□□□□ -1.27
DDB1-210ENST00000538129 ZNF408Q9H9D4 720 aa7.14□□□□□ -1.27
DDB1-210ENST00000538129 ZNF532Q9HCE3 1301 aa7.14□□□□□ -1.27
DDB1-210ENST00000538129 GBA2Q9HCG7 927 aaPredicted RBP7.14□□□□□ -1.27
DDB1-210ENST00000538129 AATFQ9NY61 560 aaKnown RBP eCLIP7.14□□□□□ -1.27
DDB1-210ENST00000538129 DMGDHQ9UI17 866 aaKnown RBP7.14□□□□□ -1.27
DDB1-210ENST00000538129 SCAF8Q9UPN6 1271 aaKnown RBP7.14□□□□□ -1.27
DDB1-210ENST00000538129 RASSF10A6NK89 507 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 PHF20L1A8MW92 1017 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 RNF113AO15541 343 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 RGS3P49796 1198 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 PCBP4P57723 403 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 TCP10Q12799 353 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 MAP3K11Q16584 847 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 DEFB115Q30KQ5 88 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 NOM1Q5C9Z4 860 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 ARMC9Q7Z3E5 817 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 TEX11Q8IYF3 940 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 CMTR1Q8N1G2 835 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 SH3RF3Q8TEJ3 882 aaPredicted RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 GTF3C2Q8WUA4 911 aaPredicted RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 RIOK1Q9BRS2 568 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 TMEM39BQ9GZU3 492 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
DDB1-210ENST00000538129 ABT1Q9ULW3 272 aaKnown RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.13□□□□□ -1.27
DDB1-210ENST00000538129 RPAP1Q9BWH6 1393 aaPredicted RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 ELOA3CA0A087WX78 387 aaPredicted RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 ELOA3DA6NLF2 546 aaPredicted RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 UBE2Q2LH0YL09 131 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 USP2O75604 605 aaPredicted RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 ABL1P00519 1130 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 EPXP11678 715 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 IREB2P48200 963 aaKnown RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 HUNKP57058 714 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 ELOA3BQ3SY89 546 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 LDLRAD1Q5T700 205 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 DCAF15Q66K64 600 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 KANK3Q6NY19 840 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 ZFPM1Q8IX07 1006 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 MIGA1Q8NAN2 632 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 ELOA3Q8NG57 546 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 FSD1Q9BTV5 496 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 CRNKL1Q9BZJ0 848 aaKnown RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 DHX36Q9H2U1 1008 aaKnown RBP7.12□□□□□ -1.27
DDB1-210ENST00000538129 PI4KBQ9UBF8 816 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 SEPT3Q9UH03 358 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 MAST2Q6P0Q8 1798 aa7.12□□□□□ -1.27
DDB1-210ENST00000538129 RFX7Q2KHR2 1363 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ATRNL1Q5VV63 1379 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 XYLBO75191 536 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ECE1P42892 770 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 USP5P45974 858 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 HTRA3P83110 453 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 PICALMQ13492 652 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 RGMBQ6NW40 437 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ZSCAN29Q8IWY8 852 aaPredicted RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 TGFBRAP1Q8WUH2 860 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 APPBP2Q92624 585 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 TNFRSF25Q93038 417 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 CSRNP1Q96S65 589 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 ZNF341Q9BYN7 854 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 GSX2Q9BZM3 304 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 OSBPL5Q9H0X9 879 aaPredicted RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 DDX4Q9NQI0 724 aaKnown RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 ATP8A2Q9NTI2 1148 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 EGFL7Q9UHF1 273 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ZNF112Q9UJU3 913 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 MKL2Q9ULH7 1088 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 ANGEL1Q9UNK9 670 aaKnown RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 CDK5RAP2Q96SN8 1893 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 PCNTO95613 3336 aa7.11□□□□□ -1.27
DDB1-210ENST00000538129 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
DDB1-210ENST00000538129 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 MYH1P12882 1939 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 DDTLA6NHG4 134 aaPredicted RBP7.1□□□□□ -1.27
DDB1-210ENST00000538129 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 HIP1O00291 1037 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 MBD4O95243 580 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 CHGBP05060 677 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 GNAT2P19087 354 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 MAP2K2P36507 400 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 ZNF157P51786 506 aaPredicted RBP7.1□□□□□ -1.27
DDB1-210ENST00000538129 PRKG1Q13976 671 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 ZMYM1Q5SVZ6 1142 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 TTC22Q5TAA0 569 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 MOB2Q70IA6 237 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 MIGA2Q7L4E1 593 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 TTC6Q86TZ1 520 aa7.1□□□□□ -1.27
DDB1-210ENST00000538129 METTL16Q86W50 562 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms