RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
USP44-203ENST00000537435 SBF2Q86WG5 1849 aa16■□□□□ 0.15
USP44-203ENST00000537435 ATP1A1P05023 1023 aaKnown RBP16■□□□□ 0.15
USP44-203ENST00000537435 PPP1R2P41236 205 aa16■□□□□ 0.15
USP44-203ENST00000537435 GYS2P54840 703 aa16■□□□□ 0.15
USP44-203ENST00000537435 ZBED6P86452 979 aa16■□□□□ 0.15
USP44-203ENST00000537435 MIIPQ5JXC2 388 aa16■□□□□ 0.15
USP44-203ENST00000537435 C15orf52Q6ZUT6 534 aaKnown RBP16■□□□□ 0.15
USP44-203ENST00000537435 CERS3Q8IU89 383 aa16■□□□□ 0.15
USP44-203ENST00000537435 CNBD1Q8NA66 436 aa16■□□□□ 0.15
USP44-203ENST00000537435 KIAA0895Q8NCT3 520 aa16■□□□□ 0.15
USP44-203ENST00000537435 JAKMIP2Q96AA8 810 aa16■□□□□ 0.15
USP44-203ENST00000537435 CALML4Q96GE6 196 aa16■□□□□ 0.15
USP44-203ENST00000537435 NHEJ1Q9H9Q4 299 aaPredicted RBP16■□□□□ 0.15
USP44-203ENST00000537435 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
USP44-203ENST00000537435 TMEM260Q9NX78 707 aa16■□□□□ 0.15
USP44-203ENST00000537435 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
USP44-203ENST00000537435 TXKP42681 527 aa16■□□□□ 0.15
USP44-203ENST00000537435 CNNM4Q6P4Q7 775 aa16■□□□□ 0.15
USP44-203ENST00000537435 ZNF662Q6ZS27 426 aa16■□□□□ 0.15
USP44-203ENST00000537435 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
USP44-203ENST00000537435 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
USP44-203ENST00000537435 KRT86O43790 486 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 UFL1O94874 794 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 GPS2Q13227 327 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 FAM182BQ5T319 152 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 GBP3Q9H0R5 595 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 SLC39A2Q9NP94 309 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 SAR1BQ9Y6B6 198 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 RCCD1A6NED2 376 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 USP17L5A8MUK1 530 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 SRGAP2O75044 1071 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 TUBBP07437 444 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 VPS72Q15906 364 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 ZBTB9Q96C00 473 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 SEMA6BQ9H3T3 888 aa15.99■□□□□ 0.15
USP44-203ENST00000537435 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 IPO7O95373 1038 aaKnown RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 PLCG2P16885 1265 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 RHBDL3P58872 404 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 GRB10Q13322 594 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 FKBP15Q5T1M5 1219 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 PAPD7Q5XG87 772 aaKnown RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 SV2BQ7L1I2 683 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 ZSCAN29Q8IWY8 852 aaPredicted RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 CCDC170Q8IYT3 715 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 TXLNBQ8N3L3 684 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 EHBP1Q8NDI1 1231 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 ERGIC2Q96RQ1 377 aa15.98■□□□□ 0.15
USP44-203ENST00000537435 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 FRMPD2Q68DX3 1309 aaPredicted RBP15.98■□□□□ 0.15
USP44-203ENST00000537435 ESYT2A0FGR8 921 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 ORC2Q13416 577 aaPredicted RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 COBLL1Q53SF7 1204 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 MSL3Q8N5Y2 521 aaKnown RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 MTMR9Q96QG7 549 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 MMS19Q96T76 1030 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 RIOX1Q9H6W3 641 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 BLOC1S4Q9NUP1 217 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 ADAM21Q9UKJ8 722 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 HNRNPH2P55795 449 aaKnown RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 CASP8Q14790 479 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 MFSD14BQ5SR56 506 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 CENPPQ6IPU0 288 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 WDR93Q6P2C0 686 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 LRWD1Q9UFC0 647 aa15.97■□□□□ 0.15
USP44-203ENST00000537435 DDX60LQ5H9U9 1706 aaKnown RBP15.97■□□□□ 0.15
USP44-203ENST00000537435 A0A1W2PQJ5 194 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 MYMKA6NI61 221 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 PDHBP11177 359 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 IL1R1P14778 569 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 NOVP48745 357 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 CYP27A1Q02318 531 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 CALCRLQ16602 461 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 FIGNQ5HY92 759 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 COA7Q96BR5 231 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 CAPZA3Q96KX2 299 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 PNMA5Q96PV4 448 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 GGA1Q9UJY5 639 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 USP14P54578 494 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 DYMQ7RTS9 669 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 EXOC4Q96A65 974 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 VPS18Q9P253 973 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 STK17AQ9UEE5 414 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 DUSP10Q9Y6W6 482 aa15.96■□□□□ 0.15
USP44-203ENST00000537435 MYH1P12882 1939 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 SLC37A4O43826 429 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 N4BP1O75113 896 aaKnown RBP15.95■□□□□ 0.14
USP44-203ENST00000537435 TDP2O95551 362 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms