RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 DBR1Q9UK59 544 aaKnown RBP8.94□□□□□ -0.98
CCDC7-208ENST00000537047 PRICKLE3O43900 615 aaPredicted RBP8.93□□□□□ -0.98
CCDC7-208ENST00000537047 ASGR2P07307 311 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 GIPRP48546 466 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
CCDC7-208ENST00000537047 EIF6P56537 245 aaKnown RBP8.93□□□□□ -0.98
CCDC7-208ENST00000537047 CORO7P57737 925 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 C9orf131Q5VYM1 1079 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 HEATR6Q6AI08 1181 aaKnown RBP8.93□□□□□ -0.98
CCDC7-208ENST00000537047 RCSD1Q6JBY9 416 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 PRRT2Q7Z6L0 340 aaPredicted RBP8.93□□□□□ -0.98
CCDC7-208ENST00000537047 CPNE8Q86YQ8 564 aa8.93□□□□□ -0.98
CCDC7-208ENST00000537047 TARBP2Q15633 366 aaKnown RBP8.92□□□□□ -0.98
CCDC7-208ENST00000537047 TEPSINQ96N21 525 aa8.92□□□□□ -0.98
CCDC7-208ENST00000537047 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
CCDC7-208ENST00000537047 GULP1Q9UBP9 304 aa8.92□□□□□ -0.98
CCDC7-208ENST00000537047 CGGBP1Q9UFW8 167 aaPredicted RBP8.92□□□□□ -0.98
CCDC7-208ENST00000537047 PMLP29590 882 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 HTRA3P83110 453 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 CAP1Q01518 475 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 DLX2Q07687 328 aaPredicted RBP8.91□□□□□ -0.98
CCDC7-208ENST00000537047 EEF1DP3Q658K8 133 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 DBX2Q6ZNG2 339 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 ALG3Q92685 438 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 PMF1-BGLAPU3KQ54 211 aa8.91□□□□□ -0.98
CCDC7-208ENST00000537047 SCAMP3O14828 347 aaKnown RBP8.9□□□□□ -0.98
CCDC7-208ENST00000537047 KCNC1P48547 511 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 COL9A2Q14055 689 aaPredicted RBP8.9□□□□□ -0.98
CCDC7-208ENST00000537047 PPP2R5EQ16537 467 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 FRMD5Q7Z6J6 570 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 RGS22Q8NE09 1264 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 GPRASP2Q96D09 838 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 PHAXQ9H814 394 aaKnown RBP8.9□□□□□ -0.98
CCDC7-208ENST00000537047 FAN1Q9Y2M0 1017 aa8.9□□□□□ -0.98
CCDC7-208ENST00000537047 C2orf71A6NGG8 1288 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 SEPHS1P49903 392 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 LIPIQ6XZB0 460 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 GGNQ86UU5 652 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 LZTR1Q8N653 840 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 NOX5Q96PH1 765 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 GBP3Q9H0R5 595 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 APEX2Q9UBZ4 518 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 BACE2Q9Y5Z0 518 aa8.89□□□□□ -0.99
CCDC7-208ENST00000537047 NCAM1P13591 858 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 RTP5Q14D33 572 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 MBLAC2Q68D91 279 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 SAPCD2Q86UD0 394 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 FAM169BQ8N8A8 192 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 ZNF513Q8N8E2 541 aaPredicted RBP8.88□□□□□ -0.99
CCDC7-208ENST00000537047 RASGRP4Q8TDF6 673 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 SHDQ96IW2 340 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 LGR4Q9BXB1 951 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 SIT1Q9Y3P8 196 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 SLC12A7Q9Y666 1083 aa8.88□□□□□ -0.99
CCDC7-208ENST00000537047 PPM1BO75688 479 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 NASPP49321 788 aaPredicted RBP8.87□□□□□ -0.99
CCDC7-208ENST00000537047 HDLBPQ00341 1268 aaKnown RBP8.87□□□□□ -0.99
CCDC7-208ENST00000537047 AMPD2Q01433 879 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 C19orf47Q8N9M1 422 aaKnown RBP8.87□□□□□ -0.99
CCDC7-208ENST00000537047 SYT3Q9BQG1 590 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 RNF38Q9H0F5 515 aa8.87□□□□□ -0.99
CCDC7-208ENST00000537047 KIAA1211LQ6NV74 962 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 FERMT3Q86UX7 667 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 NT5DC4Q86YG4 428 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 SMARCC2Q8TAQ2 1214 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.86□□□□□ -0.99
CCDC7-208ENST00000537047 SUGT1Q9Y2Z0 365 aa8.86□□□□□ -0.99
CCDC7-208ENST00000537047 C7orf72A4D263 438 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 ADRB1P08588 477 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 VAMP1P23763 118 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 B3GNT8Q7Z7M8 397 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 TSPAN17Q96FV3 270 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 DUSP10Q9Y6W6 482 aa8.85□□□□□ -0.99
CCDC7-208ENST00000537047 NPHP3-ACAD11A0A0J9YXS1 232 aa8.84□□□□□ -0.99
CCDC7-208ENST00000537047 ZBTB7CA1YPR0 619 aa8.84□□□□□ -0.99
CCDC7-208ENST00000537047 PLP2Q04941 152 aa8.84□□□□□ -0.99
CCDC7-208ENST00000537047 RCC1LQ96I51 464 aaKnown RBP8.84□□□□□ -0.99
CCDC7-208ENST00000537047 AKT3Q9Y243 479 aa8.84□□□□□ -0.99
CCDC7-208ENST00000537047 SH3D21A4FU49 640 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 KCNH1O95259 989 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 FUCA1P04066 466 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 NTRK1P04629 796 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 PAMP19021 973 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 GJA8P48165 433 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 EFEMP1Q12805 493 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 VHLLQ6RSH7 139 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 CABP7Q86V35 215 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 OR6P1Q8NGX9 317 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 USP33Q8TEY7 942 aa8.83□□□□□ -1
CCDC7-208ENST00000537047 PLS3P13797 630 aa8.82□□□□□ -1
CCDC7-208ENST00000537047 GRB10Q13322 594 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms