RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PWP2Q15269 919 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 MYLIPQ8WY64 445 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ESR2Q92731 530 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 SEZ6LQ9BYH1 1024 aa23.13■■□□□ 1.29
TNFRSF1B-204ENST00000536782 TMEM240Q5SV17 173 aa23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 TMEM63BQ5T3F8 832 aa23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 C16orf59Q7L2K0 433 aa23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PLEKHM2Q8IWE5 1019 aa23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 MAFAQ8NHW3 353 aaPredicted RBP23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 OSBPL3Q9H4L5 887 aa23.12■■□□□ 1.29
TNFRSF1B-204ENST00000536782 GBF1Q92538 1859 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ZNF213O14771 459 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 SNHG28P0DPA3 235 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 NUCB1Q02818 461 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 DUSP28Q4G0W2 176 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 RNF207Q6ZRF8 634 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CLEC4DQ8WXI8 215 aa23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
TNFRSF1B-204ENST00000536782 NEDD4P46934 1319 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 IGHDP01880 384 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ACRP10323 421 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 FOSL2P15408 326 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 DNAJB2P25686 324 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CALML3P27482 149 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CYP2C18P33260 490 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 SLC30A10Q6XR72 485 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 DGKHQ86XP1 1220 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 MPHOSPH6Q99547 160 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ZKSCAN3Q9BRR0 538 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 WDR11Q9BZH6 1224 aa23.1■■□□□ 1.29
TNFRSF1B-204ENST00000536782 GRIN2DO15399 1336 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 WDR19Q8NEZ3 1342 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CHD7Q9P2D1 2997 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 NT5C2P49902 561 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 GPATCH4Q5T3I0 446 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CWC27Q6UX04 472 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 ZNF365Q70YC5 407 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 HIPK3Q9H422 1215 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
TNFRSF1B-204ENST00000536782 PSMC6P62333 389 aa23.08■■□□□ 1.29
TNFRSF1B-204ENST00000536782 CCDC178Q5BJE1 867 aa23.08■■□□□ 1.29
TNFRSF1B-204ENST00000536782 RASIP1Q5U651 963 aa23.08■■□□□ 1.29
TNFRSF1B-204ENST00000536782 IQCA1Q86XH1 822 aa23.08■■□□□ 1.29
TNFRSF1B-204ENST00000536782 IL23AQ9NPF7 189 aa23.08■■□□□ 1.29
TNFRSF1B-204ENST00000536782 RBM47A0AV96 593 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 HIP1O00291 1037 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 GOLGA8HP0CJ92 632 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 RPS6P62753 249 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PDE4DQ08499 809 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 TIFAQ96CG3 184 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 TRPV6Q9H1D0 765 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 ZNF576Q9H609 170 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 POLR3EQ9NVU0 708 aa23.07■■□□□ 1.28
TNFRSF1B-204ENST00000536782 B4GALT4O60513 344 aa23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 KDM4AO75164 1064 aa23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 CPT1AP50416 773 aa23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 GRIN2CQ14957 1233 aa23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 NOC4LQ9BVI4 516 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 UMODL1Q5DID0 1318 aa23.06■■□□□ 1.28
TNFRSF1B-204ENST00000536782 B4DLN1 442 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 FGBP02675 491 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MRPL12P52815 198 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 USH1GQ495M9 461 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PNMA1Q8ND90 353 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 OR6J1Q8NGC5 347 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 EXOC6Q8TAG9 804 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 HERVK_113Q902F9 699 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PBX4Q9BYU1 374 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 UBA5Q9GZZ9 404 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 KAT14Q9H8E8 782 aa23.05■■□□□ 1.28
TNFRSF1B-204ENST00000536782 GRXCR1A8MXD5 290 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 NKRFO15226 690 aaKnown RBP eCLIP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MYL3P08590 195 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 EDNRBP24530 442 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 CCL23P55773 120 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PURAQ00577 322 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PPP2R5BQ15173 497 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 BRDTQ58F21 947 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 RGS22Q8NE09 1264 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 DSCC1Q9BVC3 393 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 ALDH8A1Q9H2A2 487 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 CPVLQ9H3G5 476 aa23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 GPHNQ9NQX3 736 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MUC3AQ02505 3323 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 NCOR1O75376 2440 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 B4E1Z4 1266 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 PBX2P40425 430 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 IMMTQ16891 758 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 SCFD2Q8WU76 684 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 ANKS1AQ92625 1134 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 RAD50Q92878 1312 aa23.03■■□□□ 1.28
TNFRSF1B-204ENST00000536782 REV3LO60673 3130 aa23.02■■□□□ 1.28
TNFRSF1B-204ENST00000536782 SUPT20HL2P0C7V6 817 aa23.02■■□□□ 1.28
TNFRSF1B-204ENST00000536782 CDC37Q16543 378 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MTG1Q9BT17 334 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1B-204ENST00000536782 MAF1Q9H063 256 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms