RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 A0A0G2JMZ2 1700 aa14.7□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SMTNL1A8MU46 457 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CTIFO43310 598 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CELF2O95319 508 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 KRT2P35908 639 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 GSDMDP57764 484 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 DHX8Q14562 1220 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TNFRSF25Q93038 417 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 WNT7AO00755 349 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 IKBKBO14920 756 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CUTAO60888 179 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 GJA5P36382 358 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SAFBQ15424 915 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 DPCR1Q3MIW9 517 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 RESP18Q5W5W9 173 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 OPTNQ96CV9 577 aa14.69□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 FLOT1O75955 427 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SYKP43405 635 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 USP14P54578 494 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 NCAPHQ15003 741 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ZRSR1Q15695 479 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TREML2Q5T2D2 321 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SHC4Q6S5L8 630 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ARMC9Q7Z3E5 817 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SH3GLB2Q9NR46 395 aa14.68□□□□□ -0.06
CDK5RAP3-202ENST00000536708 A0A087WWV3 80 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 RIOK3O14730 519 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ITGBL1O95965 494 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 LDLRAD1Q5T700 205 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ERCC4Q92889 916 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ZMYND12Q9H0C1 365 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 FOXP1Q9H334 677 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 GBA2Q9HCG7 927 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 FEM1BQ9UK73 627 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PCDHA4Q9UN74 947 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PAXBP1Q9Y5B6 917 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SMCO2A6NFE2 343 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 M0R2N6 131 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TOB1P50616 345 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CCZ1BP86790 482 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CCZ1P86791 482 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 MKRN3Q13064 507 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SYCP1Q15431 976 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 UBE2SQ16763 222 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CST9Q5W186 159 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PIK3AP1Q6ZUJ8 805 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ERO1BQ86YB8 467 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 BLIDQ8IZY5 108 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 C12orf42Q96LP6 360 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SLF1Q9BQI6 1058 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 RANBP17Q9H2T7 1088 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TMEM260Q9NX78 707 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PCDHA1Q9Y5I3 950 aa14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 MORC2Q9Y6X9 1032 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
CDK5RAP3-202ENST00000536708 MARCKSP29966 332 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TPM4P67936 248 aa14.66□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ATG4CQ96DT6 458 aa14.66□□□□□ -0.06
CDK5RAP3-202ENST00000536708 OPLAHO14841 1288 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PEX10O60683 326 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TNNT1P13805 278 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ZSCAN20P17040 1043 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PPATQ06203 517 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 FAM160B2Q86V87 743 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 FBXO11Q86XK2 927 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 DAGLBQ8NCG7 672 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ANKRD7Q92527 254 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 BRMS1Q9HCU9 246 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PPP1R9AQ9ULJ8 1098 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PCDHA6Q9UN73 950 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PCDHA8Q9Y5H6 950 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ZNF536O15090 1300 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 C19orf81C9J6K1 198 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 hCG_1984214I3L0E3 225 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SKILP12757 684 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 CALML3P27482 149 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 KCNJ6P48051 423 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ADCY7P51828 1080 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 SH3D19Q5HYK7 790 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 ZNF713Q8N859 430 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 AGBL1Q96MI9 1066 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 AMNQ9BXJ7 453 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 BIN2Q9UBW5 565 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-202ENST00000536708 PCNTO95613 3336 aa14.65□□□□□ -0.07
CDK5RAP3-202ENST00000536708 LCTP09848 1927 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 A0A0G2JLL6 359 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 ESYT2A0FGR8 921 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 USP17L15C9J2P7 530 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 USP17L13C9JLJ4 530 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 USP17L11C9JVI0 530 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 USP17L18D6R9N7 530 aa14.64□□□□□ -0.07
CDK5RAP3-202ENST00000536708 USP17L22D6RA61 530 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms