RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 FAAP100Q0VG06 881 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 IQSEC1Q6DN90 963 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 Q7L0L9 218 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 MORC4Q8TE76 937 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
RTN3P1-201ENST00000536295 A0A0U1RQG5 324 aaPredicted RBP16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 PDE4DQ08499 809 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 SEC23AQ15436 765 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 SHHQ15465 462 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 C9orf50Q5SZB4 431 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 STAG2Q8N3U4 1231 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 DEFB123Q8N688 67 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 TOX2Q96NM4 488 aa16.68■□□□□ 0.26
RTN3P1-201ENST00000536295 E7EWF7 191 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 ARVCFO00192 962 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 NKX3-2P78367 333 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 ABCB11O95342 1321 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 MROH7Q68CQ1 1323 aa16.67■□□□□ 0.26
RTN3P1-201ENST00000536295 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 ERICH2A1L162 156 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 ZEB2O60315 1214 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 CDK7P50613 346 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 SKAP1Q86WV1 359 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 FBXO11Q86XK2 927 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 DNERQ8NFT8 737 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 Q9Y3F1 56 aa16.66■□□□□ 0.26
RTN3P1-201ENST00000536295 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 EPHB4P54760 987 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 FPGSQ05932 587 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 SENP2Q9HC62 589 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
RTN3P1-201ENST00000536295 B4DLN1 442 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 CABYRO75952 493 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 EDNRBP24530 442 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 PSMC6P62333 389 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 WTAPQ15007 396 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 MCF2L2Q86YR7 1114 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 FAM126BQ8IXS8 530 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 OR6J1Q8NGC5 347 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 SYTL5Q8TDW5 730 aaPredicted RBP16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 TAAR1Q96RJ0 339 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 TBX21Q9UL17 535 aa16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 MRPL11Q9Y3B7 192 aaKnown RBP16.64■□□□□ 0.25
RTN3P1-201ENST00000536295 RBM47A0AV96 593 aaKnown RBP16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 TIMP1P01033 207 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 MYL3P08590 195 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 COPS5Q92905 334 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
RTN3P1-201ENST00000536295 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 PPP1R11O60927 126 aaPredicted RBP16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 CFBP00751 764 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 TXNP10599 105 aaKnown RBP16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 CPT1AP50416 773 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 ANTXR2P58335 489 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 GRM4Q14833 912 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 NSUN6Q8TEA1 469 aaKnown RBP16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 FAM161BQ96MY7 647 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 GRIN2DO15399 1336 aa16.62■□□□□ 0.25
RTN3P1-201ENST00000536295 ZBTB5O15062 677 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 CD4P01730 458 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 EIF2AK2P19525 551 aaKnown RBP16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 SLC35G1Q2M3R5 365 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 ARHGEF16Q5VV41 709 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 CATIPQ7Z7H3 387 aa16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
RTN3P1-201ENST00000536295 SLC43A3Q8NBI5 491 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms