RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
MSRB3-206ENST00000535664 CENPFP49454 3210 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 PARP14Q460N5 1801 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 COBLO75128 1261 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 FARP2O94887 1054 aaPredicted RBP16.76■□□□□ 0.27
MSRB3-206ENST00000535664 SYT1P21579 422 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
MSRB3-206ENST00000535664 PKN1Q16512 942 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 ZNF792Q3KQV3 632 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 NECAB2Q7Z6G3 386 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 ANKRD35Q8N283 1001 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 MAML3Q96JK9 1138 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
MSRB3-206ENST00000535664 KIAA0100Q14667 2235 aaKnown RBP16.76■□□□□ 0.27
MSRB3-206ENST00000535664 PFASO15067 1338 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 DEXIO95424 95 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 BRD1O95696 1058 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 ICAM1P05362 532 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
MSRB3-206ENST00000535664 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 CCDC82Q8N4S0 544 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 AIFM3Q96NN9 605 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 RANBP17Q9H2T7 1088 aaKnown RBP16.75■□□□□ 0.27
MSRB3-206ENST00000535664 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
MSRB3-206ENST00000535664 CNGA1P29973 690 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 TRIM32Q13049 653 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 TRAF1Q13077 416 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 MAMDC4Q6UXC1 1216 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 TINF2Q9BSI4 451 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 FLRT1Q9NZU1 646 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
MSRB3-206ENST00000535664 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
MSRB3-206ENST00000535664 SYNGAP1Q96PV0 1343 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 MYH6P13533 1939 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 DNAJC25-GNG10A0A024R161 153 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 SEPT4O43236 478 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 STX6O43752 255 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 PDCP20941 246 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 CYP2C19P33261 490 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 NUCB2P80303 420 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 LARP1BQ659C4 914 aaKnown RBP16.73■□□□□ 0.27
MSRB3-206ENST00000535664 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 ALG1Q9BT22 464 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 UBA5Q9GZZ9 404 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
MSRB3-206ENST00000535664 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
MSRB3-206ENST00000535664 ZNF536O15090 1300 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 LOC102724159A0A0B4J2E5 919 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 hCG_1642624A0A1W2PR95 340 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 CYBAP13498 195 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 PWP2Q15269 919 aaKnown RBP16.72■□□□□ 0.27
MSRB3-206ENST00000535664 PFKFB3Q16875 520 aaPredicted RBP16.72■□□□□ 0.27
MSRB3-206ENST00000535664 LHX8Q68G74 356 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 ADGRF4Q8IZF3 695 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 WASF1Q92558 559 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 JMJD4Q9H9V9 463 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 RBM27Q9P2N5 1060 aaKnown RBP16.72■□□□□ 0.27
MSRB3-206ENST00000535664 NR2E3Q9Y5X4 410 aa16.72■□□□□ 0.27
MSRB3-206ENST00000535664 COL11A1P12107 1806 aaPredicted RBP16.71■□□□□ 0.27
MSRB3-206ENST00000535664 ASB14A6NK59 587 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 POTEB2H3BUK9 544 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 PGK2P07205 417 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 ALAS1P13196 640 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 CCND3P30281 292 aaPredicted RBP16.71■□□□□ 0.27
MSRB3-206ENST00000535664 SLC16A2P36021 539 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 PIGSQ96S52 555 aa16.71■□□□□ 0.27
MSRB3-206ENST00000535664 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
MSRB3-206ENST00000535664 B4DLN1 442 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
MSRB3-206ENST00000535664 SCG2P13521 617 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
MSRB3-206ENST00000535664 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
MSRB3-206ENST00000535664 FOSBP53539 338 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 DPF3Q92784 378 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 ABHD16BQ9H3Z7 469 aa16.7■□□□□ 0.26
MSRB3-206ENST00000535664 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
MSRB3-206ENST00000535664 VPS37CA5D8V6 355 aaPredicted RBP16.69■□□□□ 0.26
MSRB3-206ENST00000535664 AKR1A1P14550 325 aa16.69■□□□□ 0.26
MSRB3-206ENST00000535664 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
MSRB3-206ENST00000535664 KRT40Q6A162 431 aa16.69■□□□□ 0.26
MSRB3-206ENST00000535664 WWC2Q6AWC2 1192 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms