RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZBED4O75132 1171 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 NDUFB10O96000 172 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 MYL3P08590 195 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 TCEAL5Q5H9L2 206 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 PRRX2Q99811 253 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 ASB14A6NK59 587 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 F5H6K3 240 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 PDE6AP16499 860 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 LTBRP36941 435 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 KLRC3Q07444 240 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 BFSP2Q13515 415 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 SMAD2Q15796 467 aaKnown RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 CLUL1Q15846 466 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 ASCL5Q7RTU5 278 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 ERMP1Q7Z2K6 904 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 SUGP1Q8IWZ8 645 aaKnown RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 BANK1Q8NDB2 785 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 ATOH1Q92858 354 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 EAF2Q96CJ1 260 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 POLR3EQ9NVU0 708 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 CTDP1Q9Y5B0 961 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-206ENST00000535290 TRIOO75962 3097 aa9.98□□□□□ -0.81
CLIP1-206ENST00000535290 NCOR2Q9Y618 2525 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 USP17L12C9JPN9 530 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 USP17L21D6R901 530 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 GNAI2P04899 355 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 VCPP55072 806 aaKnown RBP9.97□□□□□ -0.81
CLIP1-206ENST00000535290 DLX2Q07687 328 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-206ENST00000535290 OS9Q13438 667 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-206ENST00000535290 PKN1Q16512 942 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 PTPROQ16827 1216 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 DUSP28Q4G0W2 176 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 TIGD5Q53EQ6 642 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 SLC9C2Q5TAH2 1124 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 C12orf60Q5U649 245 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 TMED8Q6PL24 325 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-206ENST00000535290 C16orf86Q6ZW13 317 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 CRBNQ96SW2 442 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-206ENST00000535290 ACAD9Q9H845 621 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 ARMT1Q9H993 441 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 CLDND1Q9NY35 253 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
CLIP1-206ENST00000535290 E9PSI1 815 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 H0Y858 1186 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 NBNO60934 754 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 LRRFIP1Q32MZ4 808 aaKnown RBP9.96□□□□□ -0.82
CLIP1-206ENST00000535290 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 EPC2Q52LR7 807 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 CNKSR3Q6P9H4 555 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-206ENST00000535290 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
CLIP1-206ENST00000535290 POP1Q99575 1024 aaKnown RBP9.96□□□□□ -0.82
CLIP1-206ENST00000535290 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-206ENST00000535290 TLR9Q9NR96 1032 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 NOD1Q9Y239 953 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 COG6Q9Y2V7 657 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 ZNF532Q9HCE3 1301 aa9.96□□□□□ -0.82
CLIP1-206ENST00000535290 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 ABHD14A-ACY1A0A1B0GW23 586 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 TCRBV5S4A2TA0A5A2 114 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 MBTPS2O43462 519 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 SURF6O75683 361 aaKnown RBP9.95□□□□□ -0.82
CLIP1-206ENST00000535290 KRT37O76014 449 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 RGS20O76081 388 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 CXCL10P02778 98 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 OAZ1P54368 228 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 ZXDAP98168 799 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 SLFN5Q08AF3 891 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 PTGISQ16647 500 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLIP1-206ENST00000535290 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 AFAP1L1Q8TED9 768 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 DHX38Q92620 1227 aaKnown RBP9.95□□□□□ -0.82
CLIP1-206ENST00000535290 WDR11Q9BZH6 1224 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 NSUN3Q9H649 340 aaKnown RBP9.95□□□□□ -0.82
CLIP1-206ENST00000535290 VTA1Q9NP79 307 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 RNF146Q9NTX7 359 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 INSL6Q9Y581 213 aa9.95□□□□□ -0.82
CLIP1-206ENST00000535290 C5orf42Q9H799 3197 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 PROB1E7EW31 1015 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 H3BNC9 293 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 STXBP3O00186 592 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 BCAR3O75815 825 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 SELPP16109 830 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 AVPR2P30518 371 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 ID4P47928 161 aa9.94□□□□□ -0.82
CLIP1-206ENST00000535290 CPT1AP50416 773 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms