RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 LCTP09848 1927 aa12.96□□□□□ -0.34
VAMP1-204ENST00000535180 H3BNC9 293 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 IDH1O75874 414 aaKnown RBP12.95□□□□□ -0.34
VAMP1-204ENST00000535180 MTX1Q13505 466 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 EPC2Q52LR7 807 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 FAM47CQ5HY64 1035 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 NFRKBQ6P4R8 1299 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 TMED8Q6PL24 325 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-204ENST00000535180 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 PRPF38AQ8NAV1 312 aaKnown RBP12.95□□□□□ -0.34
VAMP1-204ENST00000535180 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
VAMP1-204ENST00000535180 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
VAMP1-204ENST00000535180 GREB1LQ9C091 1923 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 EFCAB14O75071 495 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 DLX2Q07687 328 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 SMAD4Q13485 552 aaKnown RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 GPM6BQ13491 265 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 CLUL1Q15846 466 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 FAM117BQ6P1L5 589 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 ASIC4Q96FT7 647 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 CCDC17Q96LX7 622 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 SAMD11Q96NU1 681 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-204ENST00000535180 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
VAMP1-204ENST00000535180 RAD21O60216 631 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 ZBED4O75132 1171 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 PARNO95453 639 aaKnown RBP12.93□□□□□ -0.34
VAMP1-204ENST00000535180 CXCL10P02778 98 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 MYL3P08590 195 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 CCDC155Q8N6L0 562 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-204ENST00000535180 NKD2Q969F2 451 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-204ENST00000535180 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 CNTNAP3BQ96NU0 1288 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 DBNDD2Q9BQY9 259 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 CNTNAP3Q9BZ76 1288 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 RAVER2Q9HCJ3 691 aaKnown RBP12.93□□□□□ -0.34
VAMP1-204ENST00000535180 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-204ENST00000535180 MYO10Q9HD67 2058 aa12.93□□□□□ -0.34
VAMP1-204ENST00000535180 LOC730098B7Z3J9 87 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 USP17L21D6R901 530 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 KDM4AO75164 1064 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 CYP2D6P10635 497 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 CPT1AP50416 773 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 OAZ1P54368 228 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-204ENST00000535180 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
VAMP1-204ENST00000535180 IKBKEQ14164 716 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 TCTN1Q2MV58 587 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 DUSP28Q4G0W2 176 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 FBXO16Q8IX29 292 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-204ENST00000535180 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-204ENST00000535180 MEIS3Q99687 375 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 CTDP1Q9Y5B0 961 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-204ENST00000535180 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 ZFHX4Q86UP3 3567 aa12.92□□□□□ -0.34
VAMP1-204ENST00000535180 MAGEB6P1A0A0J9YX57 407 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 NBNO60934 754 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 SELPP16109 830 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 CBX2Q14781 532 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-204ENST00000535180 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
VAMP1-204ENST00000535180 VTA1Q9NP79 307 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
VAMP1-204ENST00000535180 CD207Q9UJ71 328 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
VAMP1-204ENST00000535180 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
VAMP1-204ENST00000535180 TBX10O75333 385 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 HYAL1Q12794 435 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 PTGISQ16647 500 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 A1CFQ9NQ94 594 aaKnown RBP12.9□□□□□ -0.34
VAMP1-204ENST00000535180 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
VAMP1-204ENST00000535180 MAP1BP46821 2468 aaKnown RBP12.9□□□□□ -0.34
VAMP1-204ENST00000535180 CFAP47Q6ZTR5 3102 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 EYA4O95677 639 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms