RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
CCDC84-208ENST00000534656 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
CCDC84-208ENST00000534656 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 TCP11L1Q9NUJ3 509 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 YBX2Q9Y2T7 364 aaKnown RBP16.38■□□□□ 0.21
CCDC84-208ENST00000534656 LCTP09848 1927 aa16.37■□□□□ 0.21
CCDC84-208ENST00000534656 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
CCDC84-208ENST00000534656 FGAP02671 866 aa16.37■□□□□ 0.21
CCDC84-208ENST00000534656 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
CCDC84-208ENST00000534656 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
CCDC84-208ENST00000534656 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
CCDC84-208ENST00000534656 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
CCDC84-208ENST00000534656 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 CPT1AP50416 773 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
CCDC84-208ENST00000534656 MCMDC2Q4G0Z9 681 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
CCDC84-208ENST00000534656 CLEC4DQ8WXI8 215 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 VWCEQ96DN2 955 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 SCLYQ96I15 445 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 SLC4A7Q9Y6M7 1214 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 CHD9Q3L8U1 2897 aa16.36■□□□□ 0.21
CCDC84-208ENST00000534656 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
CCDC84-208ENST00000534656 TNFRSF10AO00220 468 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 PDHBP11177 359 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 IGFBP4P22692 258 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 PDE1AP54750 535 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
CCDC84-208ENST00000534656 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 TTC14Q96N46 770 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 TRMT13Q9NUP7 481 aaKnown RBP16.35■□□□□ 0.21
CCDC84-208ENST00000534656 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
CCDC84-208ENST00000534656 A0A0D9SFI3 127 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 PFKMP08237 780 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 MYL3P08590 195 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
CCDC84-208ENST00000534656 CYP2C9P11712 490 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 CALML3P27482 149 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 RABGGTBP53611 331 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 RNF207Q6ZRF8 634 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 ASB2Q96Q27 587 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
CCDC84-208ENST00000534656 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
CCDC84-208ENST00000534656 PCDHA11Q9Y5I1 949 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 TNKSO95271 1327 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
CCDC84-208ENST00000534656 ZBBXA8MT70 800 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC84-208ENST00000534656 SNHG28P0DPA3 235 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 EDNRBP24530 442 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
CCDC84-208ENST00000534656 PDE4DQ08499 809 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
CCDC84-208ENST00000534656 PPP2R2DQ66LE6 453 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 DNERQ8NFT8 737 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.2
CCDC84-208ENST00000534656 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
CCDC84-208ENST00000534656 KPNA6O60684 536 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
CCDC84-208ENST00000534656 MYOGP15173 224 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 ATP2A2P16615 1042 aaKnown RBP16.32■□□□□ 0.2
CCDC84-208ENST00000534656 HAND2P61296 217 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
CCDC84-208ENST00000534656 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 ZNF589Q86UQ0 364 aaPredicted RBP16.32■□□□□ 0.2
CCDC84-208ENST00000534656 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 GBF1Q92538 1859 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 RAD50Q92878 1312 aa16.32■□□□□ 0.2
CCDC84-208ENST00000534656 A6NJR5 290 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 B4DLN1 442 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 MRPL12P52815 198 aaKnown RBP16.31■□□□□ 0.2
CCDC84-208ENST00000534656 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
CCDC84-208ENST00000534656 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
CCDC84-208ENST00000534656 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
CCDC84-208ENST00000534656 TXNP10599 105 aaKnown RBP16.3■□□□□ 0.2
CCDC84-208ENST00000534656 ACTN1P12814 892 aa16.3■□□□□ 0.2
CCDC84-208ENST00000534656 RFC2P35250 354 aa16.3■□□□□ 0.2
CCDC84-208ENST00000534656 RRP1P56182 461 aaKnown RBP16.3■□□□□ 0.2
CCDC84-208ENST00000534656 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
CCDC84-208ENST00000534656 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
CCDC84-208ENST00000534656 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
CCDC84-208ENST00000534656 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
CCDC84-208ENST00000534656 COPS5Q92905 334 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms